DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and REELD1

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001341560.1 Gene:REELD1 / 345051 HGNCID:53638 Length:526 Species:Homo sapiens


Alignment Length:369 Identity:85/369 - (23%)
Similarity:139/369 - (37%) Gaps:77/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MQALTMRSWLATLVTALLAVAIWPDPGQSLPQGAPETVCDTMLPFHSGGSVLPQNSVS-PFSVET 65
            ||| .:..|..|  |..||..     ..:...||....||.|.|.|.  ...||:..| ..::.|
Human     3 MQA-ALVGWACT--TLCLASC-----SSAFSHGASTVACDDMQPKHI--QAQPQHQDSHHITIHT 57

  Fly    66 SSSTLGQGQTLRVDLTGVPAGLSFGGYMIQARNRNPPHQIIGQFG--PARDGTIKLMNCENSVNN 128
            ..::...|..:.|.   |.:...|.|:::||| |...|||.|.|.  |...   |||.|.... :
Human    58 HRTSYAPGDKIPVT---VRSSRDFMGFLLQAR-RVSDHQIAGTFVLIPPHS---KLMTCFQEA-D 114

  Fly   129 SATHSNAGPKQQVILEWQSPVDFLGQVVFNATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLPTQ 193
            :.|||:...|:.:...|::|...:|.:.|..::.|||..:|..:.|..|.             .|
Human   115 AVTHSDKSLKRNLSFVWKAPAQPVGDIKFLLSVVQSYFVYWARIESSVVS-------------QQ 166

  Fly   194 SPSAPAGTTRAPYVPPSYVAPNNVVAVSSDPIYNGCGQSKNCFGFPDGCVATKSCTSITVVTVRG 258
            :.|:.....|   :.|..:.||         ::...|..:.....|.        |.||:.....
Human   167 THSSAHSDDR---MEPRLLMPN---------LHQRLGDVEGAAPAPR--------TPITLPQQHT 211

  Fly   259 DVFEFEIQSGKGTNAAYVAVGLSDDAKMGDDLTTECVPENGRVNLY----SSLTSASPYSAVRSN 319
            .||               ||.|...|: .|:|  :.||.:..|..:    .:|:..|.::|...:
Human   212 HVF---------------AVALPGAAE-EDNL--DPVPASIWVTKFPGDAETLSQPSSHTATEGS 258

  Fly   320 VNQNSARLLDASIVDGVIYCRVQR-DAVTNVQGRTFDLRNGKYH 362
            :||..:...:.::...:...|::| .|:..|...:|......:|
Human   259 INQQPSGDSNPTLEPSLEVHRLERLVALKRVSSESFASSLSTHH 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 39/132 (30%)
DOMON_SDR_2_like 223..392 CDD:187686 27/145 (19%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 1/5 (20%)
REELD1NP_001341560.1 Reeler 33..155 CDD:366876 39/131 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..272 5/29 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..336 2/9 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141360
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45828
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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