DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and Frrs1

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001106950.1 Gene:Frrs1 / 20321 MGIID:108076 Length:592 Species:Mus musculus


Alignment Length:585 Identity:167/585 - (28%)
Similarity:258/585 - (44%) Gaps:88/585 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LATLVTALLAVAIWPDPGQSLPQGAPETVCDTMLPFHSGGSVLPQNSVSPFS-----VETSSSTL 70
            |:.||.|||..::...|...:|.              |.|.::||::.||.|     :..|.:|.
Mouse     8 LSVLVIALLTCSVTAYPNGKVPM--------------SCGGMIPQHNHSPQSEPIHQITVSQTTF 58

  Fly    71 GQGQTLRVDLTGVPAGLSFGGYMIQARN----RNPPHQIIGQFGPARDGTIKLMNCENSVNNSAT 131
            ..|..::|.|:|.|    |.|::::||:    ..||   ||.|........:|:.|.:....:.:
Mouse    59 KPGDQIKVTLSGPP----FRGFLLEARDAENLSGPP---IGSFTLIDSEESQLLTCTDVQGLAVS 116

  Fly   132 HSNAGPKQQVILEWQSPVDFLGQVVFNATIAQSYNEFWVGVP----SQPVQIVRRDLSAAPPLPT 192
            |:.:..|.::.:.|.:|......:.|.||:.|.:..:||.:|    |||         .|||..|
Mouse   117 HTRSSKKTEIKVYWDAPSPAPDHIRFLATVVQKFKIYWVKIPSPVISQP---------NAPPFTT 172

  Fly   193 QSPSAPAGTTRAPYVPPSYVAPNNVVAVSSDPIYN-GCGQSKNCFGFPDGCVATKSCTSITVVTV 256
                 |..||:....|||       |:..:.|... .||..|.|...|..|...|....:.:...
Mouse   173 -----PKATTQPLTTPPS-------VSHLTKPFSAFECGNKKFCVRSPLNCDPEKEPACVFLSFT 225

  Fly   257 RGDVFEFEIQSGKGTNAAYVAVGLSDDAKMGDDLTTECVPENGRVNLYSSLTSASPYSAV--RSN 319
            |.:  :..:....|.:..||:...|.|..||||....|:.|:..|::.||..:...|..:  |..
Mouse   226 RDN--QSVMVEMSGPSDGYVSFAFSHDQWMGDDDAYLCIREDQTVDIQSSYLTGRSYPVMDSRGT 288

  Fly   320 VNQNSARLLDASIVDGVIYCRVQRDAVTNVQGRTFDLRNGKYHLLVASGSSLKENSVGYHDIGRL 384
            :...:.||     .|.||.|..:|: :|..:.:...:.|..|::..|.|.|        || ||:
Mouse   289 LEDMAWRL-----ADSVIQCSFRRN-ITLPEAKNRFVLNESYYIFFAEGPS--------HD-GRI 338

  Fly   385 --PSAQPI------NLAEVQDLSGSSRL--LIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQ 439
              .|.||:      |:.:.....|.||.  |::.|||.|..||:.|.|:|::.||:|:..|..:.
Mouse   339 FRHSQQPLITYEKYNVTDTPKSVGGSRSSPLLKAHGALMFVAWMTTVSIGVLVARFFRSVWSKAF 403

  Fly   440 SCGTDQWFAWHRLLMVTTWSLTVAAYVLIWVELKQAVWHA--HSIIGLITVILCFIQPIGALFRP 502
            ......||..||:|||.|..||..|:||.:|......|.|  |..:|...:.|..:||:.|.|||
Mouse   404 FLREAAWFQVHRMLMVATSLLTCVAFVLPFVYRGGWSWRAGYHPYLGCTVMTLAVLQPLLATFRP 468

  Fly   503 GPNDKKRPYFNWGHWLGGNLAHILGIVTIFFSVKLPKAELPE-WMDWILVSFVVVHVLVHLIFSI 566
            ..:|.:|..|||.||..|..|.|:.:..:|..:.||...||. ...:.::.|||.|:...:|..|
Mouse   469 PLHDPRRQVFNWTHWSVGTAARIIAVAAMFLGMDLPGLNLPSPQKTYAMMGFVVWHIGTEVILEI 533

  Fly   567  566
            Mouse   534  533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 33/138 (24%)
DOMON_SDR_2_like 223..392 CDD:187686 45/179 (25%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 70/207 (34%)
Frrs1NP_001106950.1 Reeler 32..155 CDD:280232 32/129 (25%)
DOMON_SDR_2_like 192..354 CDD:187686 45/178 (25%)
Cyt_b561_FRRS1_like 320..533 CDD:176490 75/221 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831298
Domainoid 1 1.000 115 1.000 Domainoid score I6039
eggNOG 1 0.900 - - E1_KOG4293
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40653
Inparanoid 1 1.050 201 1.000 Inparanoid score I3767
Isobase 1 0.950 - 0 Normalized mean entropy S7160
OMA 1 1.010 - - QHG46024
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001198
OrthoInspector 1 1.000 - - oto91919
orthoMCL 1 0.900 - - OOG6_102865
Panther 1 1.100 - - O PTHR45828
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3670
SonicParanoid 1 1.000 - - X4013
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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