DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and frrs1

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_002937007.1 Gene:frrs1 / 100497064 XenbaseID:XB-GENE-989220 Length:639 Species:Xenopus tropicalis


Alignment Length:694 Identity:199/694 - (28%)
Similarity:303/694 - (43%) Gaps:117/694 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LATLVTALLAVAIWPDPGQSLPQGAPETVCDTMLPFHSGGSVLPQNSVSPF-SVETSSSTLGQGQ 74
            |...:..|...|:.|..|  .|.|...:.|.:|.|.|...   ||  ..|. |:....:....|.
 Frog     9 LVIFLIFLCTCALTPVTG--YPSGKVTSACRSMRPDHGHA---PQ--AEPIHSINVDKTIFNPGD 66

  Fly    75 TLRVDLTGVPAGLSFGGYMIQARN-RNPPHQIIGQFGPARDGTIKLMNCENSVNNSATHSNAGPK 138
            .::|.|    :|..|.|:::|||: .|.....:|.|....:...:|:.|....|::.:|::...|
 Frog    67 RIKVTL----SGSRFNGFLVQARDVENLDGSAVGSFALIDERVSQLLTCGGIQNSAVSHTSKERK 127

  Fly   139 QQVILEWQSPVDFLGQVVFNATIAQSYNEFWVGVP----SQPVQIVRRDLSAAPPLPTQSPSAPA 199
            .||...|.:|.:....|.|.||:.:.|..:||.:.    |||         ..||:|:::.|   
 Frog   128 LQVEFFWIAPANSPKHVQFLATVVEKYKIYWVKIAGPIISQP---------NTPPIPSKNHS--- 180

  Fly   200 GTTRAPYVPPSY---VAPNNVVAVSSDPIYNGCGQSKNCFGFPDGC--VATKSCTSITVVTVRGD 259
              :..|.||||.   .:|            .|||.:|.|...|..|  .....|..::       
 Frog   181 --SMIPVVPPSLHKRFSP------------AGCGSTKFCIRNPVSCDPEHNPKCFFLS------- 224

  Fly   260 VFEFEIQS----GKGTNAAYVAVGLSDDAKMGDDLTTECVPENGRVNLYSSLTSASPYSAVRSNV 320
             |..:.||    ..|....|::..||.|..||||....||.|:..|.:..:      |...||:.
 Frog   225 -FRKDGQSVLVEMSGPGQGYISFALSYDHWMGDDDAYLCVKEDQGVQINPA------YIRGRSHP 282

  Fly   321 NQNSARLL-DAS--IVDGVIYCRVQRDAVTNVQGRTFDLRNGKYHLLVASGSSLKENSVGYHDIG 382
            ..:|..:| |.:  :.||||.|..:|:.........||| .|.|::.:|.|.: |:..:..|...
 Frog   283 EVSSPDVLRDVAWRLEDGVIQCSFKRNIQIPASKERFDL-GGSYYIFLADGDA-KDGLLLRHQRQ 345

  Fly   383 RLPSAQPINLAEV-QDLSGS-SRLLIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCGTDQ 445
            .|.:.:..|::.. :|:.|| |.|:|:.|||.|..||:.|.|:|:|.||:||..|..|...|...
 Frog   346 PLMTNRMYNISGFPEDVGGSRSPLIIKFHGAMMFVAWMTTVSIGVIIARFFKPVWPTSSLFGEKI 410

  Fly   446 WFAWHRLLMVTTWSLTVAAYVLIWVE----LKQAVWHAHSIIGLITVILCFIQPIGALFRPGPND 506
            ||..||.||:||..||..|:||.::.    .|:|.:|.|  :|:..:||..:||:.|:|||.|..
 Frog   411 WFQIHRCLMITTVILTAIAFVLPFIYRGYFSKRAGYHPH--LGVTVMILTVLQPVLAVFRPPPQT 473

  Fly   507 KKRPYFNWGHWLGGNLAHILGIVTIFFSVKLPKAELPE-WMDWILVSFVVVHVLVHLIFSI-GLC 569
            .:|..|||.||..|..|.|:.:..:|..:.|...:||: |..:.:|.||:.||.|.|:... |.|
 Frog   474 PRRGIFNWTHWATGTAARIIAVTAMFIGMDLQALDLPDPWDTYTMVGFVLWHVFVDLLLEAHGFC 538

  Fly   570 L----------NHWQ--------IGGMASERHLSQRANTFQMGDMSHHQQHAMRNGMSMERKM-- 614
            |          .|.|        |||  |::...|.|....:..:.  :.||..:..:||...  
 Frog   539 LLKKEYISKLPCHLQALHQYGLFIGG--SKQSDPQSAKVVLVPSVL--EGHAGHSAKTMEEDQVG 599

  Fly   615 -------DAPYAGMRKGLLGVYGVVLILFVTVLILLVVLAPIEQ 651
                   :|.....:|.:|.||     :...:..|:..||.|.|
 Frog   600 ILNSSPDEAEGHTFKKIVLTVY-----ICGNLAFLITFLAAINQ 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 34/131 (26%)
DOMON_SDR_2_like 223..392 CDD:187686 46/177 (26%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 73/201 (36%)
frrs1XP_002937007.1 Reeler 36..159 CDD:366876 34/131 (26%)
DOMON_SDR_2_like 193..349 CDD:187686 47/183 (26%)
Cyt_b561_FRRS1_like 321..534 CDD:176490 80/216 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40653
Inparanoid 1 1.050 214 1.000 Inparanoid score I3533
OMA 1 1.010 - - QHG46024
OrthoDB 1 1.010 - - D464310at33208
OrthoFinder 1 1.000 - - FOG0001198
OrthoInspector 1 1.000 - - otm47462
Panther 1 1.100 - - O PTHR45828
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4013
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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