DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8399 and LOC100491943

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_031756879.1 Gene:LOC100491943 / 100491943 -ID:- Length:594 Species:Xenopus tropicalis


Alignment Length:570 Identity:172/570 - (30%)
Similarity:256/570 - (44%) Gaps:87/570 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QSLPQGAPETVCDTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGGYM 93
            |....|.....||||:|.|...:.  |.|:||:.|..||.:...|..:.|.|. .....:|.|::
 Frog    19 QPFGNGNVGLACDTMMPNHRTHAA--QESMSPYRVAASSYSFSPGDEITVTLL-ANFNTTFEGFL 80

  Fly    94 IQARNRNPPHQIIGQFGPARDGTIKLMNCENSVNNSATHSNAGPKQQVILEWQSPVDFLGQVVFN 158
            :|||:.. .::::|.|......: ::::|...:..:.:|.|...|..:...|.:| |....|.|.
 Frog    81 LQARSVT-GNRLVGNFRVLNSNS-QILDCGGVMGLAVSHINTSKKSNITALWTAP-DLSDNVHFR 142

  Fly   159 ATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLPTQSPSAPAGTTRAPYVPPSYVAPNNVVA--VS 221
            ||..:::..|||||.|             |.|...:||....||  |.||..||...|:.:  |.
 Frog   143 ATFVRNFKTFWVGVES-------------PLLTFITPSNQRPTT--PNVPAVYVLSTNLPSNKVG 192

  Fly   222 SDPI-YNGCGQSKNCFGFPDGCVATKSCT----SITVVTVRGDVFEFEIQSGKGTNAAYVAVGLS 281
            |..| ...||..|.||..|..|..::|..    |.:.:...|..:...|   .|.:..||:||.|
 Frog   193 STIISRESCGTDKVCFSVPTDCDPSRSTNCYFMSSSPIETSGQGYLLGI---SGPSTGYVSVGFS 254

  Fly   282 DDAKMGDDLTTECVPENGRVNLYSSLTSASPYSAVRSN---VNQNSARLLDASIVDGVIYCRVQR 343
            ||.:||:|....||     :|....:.....||..:|.   :...:..::.||..:|:|.|    
 Frog   255 DDMQMGNDDMYLCV-----MNAAGVIEVQHAYSEGKSQPRVLTPGNIEVILASYNNGIIQC---- 310

  Fly   344 DAVTNVQGRTFDLR--------------NGKYHLLVASGSSLKENSVGYH-DIGRLPSAQPINLA 393
                     ||..|              |..||:.:|.||| ....|.|| ..||..|...|:|.
 Frog   311 ---------TFIARSISILNPLQNSRSINSLYHIFLAYGSS-SNGQVQYHGPSGRFISNSRIDLL 365

  Fly   394 EVQDL-SGSSRL--LIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQ-SCGTDQWFAWHRLLM 454
            ...:: ||...|  |::.||:.|:.||:.|.|||:|.|||||.|  |.| ..|...||..|..||
 Frog   366 AASNVTSGPYGLDPLVKAHGSLMLIAWMTTGSLGMILARYFKVT--GKQLVLGKAVWFQAHFFLM 428

  Fly   455 VTTWSLTVAAYVLIWVELKQAVWH----AHSIIGLITVILCFIQPIGALFRPGPNDKKRPYFNWG 515
            ..|...|:|::||.:|  |:..|:    .|:|||.|.:.|.|.||:.|||||.|...:|..|||.
 Frog   429 ALTVCATIASFVLAFV--KEQGWNYNLSTHAIIGCIVMCLAFFQPLIALFRPSPQSSRRFIFNWF 491

  Fly   516 HWLGGNLAHILGIVTIFFSVKLPK---AELPEWMD----WILVSFVVVHV 558
            |.:...:..:|.:..:|..:::..   |.:||.|.    |..::|:.:.:
 Frog   492 HVINALVIKVLAVANLFLGLQVVSHTYAWMPEVMGGFFAWEALAFISLEI 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 35/129 (27%)
DOMON_SDR_2_like 223..392 CDD:187686 51/191 (27%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 78/210 (37%)
LOC100491943XP_031756879.1 Reeler 30..154 CDD:396550 35/129 (27%)
DOMON_SDR_2_like 196..360 CDD:187686 50/185 (27%)
Cyt_b561_FRRS1_like 333..541 CDD:176490 78/212 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 84 1.000 Domainoid score I8150
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D464310at33208
OrthoFinder 1 1.000 - - FOG0001198
OrthoInspector 1 1.000 - - otm47462
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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