DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8399 and LOC100489839

DIOPT Version :9

Sequence 1:NP_001286472.1 Gene:CG8399 / 36768 FlyBaseID:FBgn0034067 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_017949106.2 Gene:LOC100489839 / 100489839 -ID:- Length:550 Species:Xenopus tropicalis


Alignment Length:646 Identity:172/646 - (26%)
Similarity:271/646 - (41%) Gaps:138/646 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLPQGAPETVCDTMLPFHSGGSVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGGYMI 94
            |.|.|.....||||||.|.|.:  ||.:.||:.:..|::|...|.::.|.:.. .:|.:|.|:::
 Frog    18 SFPSGQISASCDTMLPQHRGST--PQTTASPYFITVSNTTFKSGDSITVTIQS-NSGNTFKGFLL 79

  Fly    95 QARNRNPPHQIIGQFGPARDGTIKLMN-------CENSVNNSATHSNAGPKQQVILEWQSPVDFL 152
            :|.:       :|  |....||..:.|       |....|::.:|::...|..|...|.:| ...
 Frog    80 EALS-------VG--GDTATGTFTITNGDTQGLSCSAGPNSAVSHTSDSSKSSVTTSWTAP-SGA 134

  Fly   153 GQVVFNATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLPTQSPSAPAGTTRAPYVPPSYVAPNNV 217
            |.|.|.||:.|.::.||.||.||                         |..|..:       :|:
 Frog   135 GPVRFRATVLQGFSTFWSGVESQ-------------------------TLMASQI-------SNI 167

  Fly   218 VAVSSDPIYNGCGQSKNCFGFPDGCVATKS-CTSITVV-TVRGDVFEFEIQSGKGTNAAYVAVGL 280
            .          ||..|.||..|..|....| |..::|| :..|.|||   .||..:...|:|||.
 Frog   168 T----------CGTGKFCFSDPANCNPDSSGCLFMSVVPSSNGYVFE---MSGPVSTLEYIAVGF 219

  Fly   281 SDDAKMGDDLTTECVPE-NGRVNLYSSLTSASPYSAVRSNVNQNSARLLDASIV----DGVIYCR 340
            |||.|||:|....|... :|.|.:.....:.       :|..|:...:...|.|    :|::.|.
 Frog   220 SDDQKMGNDDDYICATNLSGNVQIQRVFLTG-------NNSPQSKNLIFSGSPVWNYGNGIMKCC 277

  Fly   341 VQRDAVTNVQGRTFDLRNGKYHLLVASGSSLKENSVGYHDIGRLPSAQPINLAEV----QDLSGS 401
            ....|..:...|.  ..:..|::.:|:|.:.....:..|....|.:|..|:|:..    :..||.
 Frog   278 FIAQASISTLSRA--SASSTYYIFLATGPTEANGQIKQHTKIPLITAAKIDLSAFSGNNKAASGE 340

  Fly   402 SRLLIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCGTDQWFAWHRLLMVTTWSLTVAAYV 466
            |.|::. |||.|:.||:.|.::|::.|||.|.. ...|..|...||..|..||..|..||..|::
 Frog   341 STLVLG-HGALMLIAWMTTGTIGMLMARYMKNA-AKEQYFGKGLWFLMHVFLMSLTVILTSIAFI 403

  Fly   467 LIWVELKQAVWH----AHSIIGLITVILCFIQPIGALFRPGPNDKKRPYFNWGHWLGGNLAHILG 527
            :|:.|:  :.|.    ||.::|.|.:||.|:||.||:.||.|..|:|..|||.|.|...:..:|.
 Frog   404 MIFAEV--SGWSSDTGAHPVLGCIVMILSFLQPFGAMLRPAPTHKRRFIFNWAHGLNALVIKVLA 466

  Fly   528 IVTIFFSVKLPKAELPEWMDWILVSFVVVHVLVHLIFSIGLCLNHWQIGGMASERHLSQRANTFQ 592
            :.|:|..::|......:||..::..|....||.::|..:....|         |:.|.:..|.  
 Frog   467 VATLFLGLQLVDTSTNQWMPKVMGGFYGWEVLFYIILEVNTRYN---------EKELYEEVNN-- 520

  Fly   593 MGDMSHHQQHAMRNGMSMERKMDAPYAGMRKGLLGVYGVVLILFV--TVLILLVVLAPIEQ 651
                            :|:|:                .::||.||  .:..|:.:|..|.|
 Frog   521 ----------------TMKRE----------------SIILITFVCGNLAFLISLLVGIGQ 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8399NP_001286472.1 Reeler 40..170 CDD:280232 39/136 (29%)
DOMON_SDR_2_like 223..392 CDD:187686 46/175 (26%)
Cyt_b561_FRRS1_like 358..553 CDD:176490 65/202 (32%)
LOC100489839XP_017949106.2 Reeler 28..151 CDD:396550 38/135 (28%)
DOMON_SDR_2_like 169..327 CDD:187686 46/169 (27%)
Cyt_b561_FRRS1_like 292..505 CDD:176490 69/216 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 84 1.000 Domainoid score I8150
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46024
OrthoDB 1 1.010 - - D464310at33208
OrthoFinder 1 1.000 - - FOG0001198
OrthoInspector 1 1.000 - - otm47462
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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