Protein Alignment Rrp42 and RRP45a

DIOPT Version :10

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_566441.1
• Gene: RRP45a / 820485
• AraportID: AT3G12990
• Length: 307
• Species: Arabidopsis thaliana
• Alignment Length: 301
• Identity: 75/301 - (24%)
• Similarity: 128/301 - (42%)
• Gaps: 38/301 - (12%)

  Fly     6 LSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPN 70
            |:..|..::...::.:.|.|||...|||.:.::.|   ...||::::|..|.::..|..::..|.
plant    11 LTVNESKFVESALQSELRVDGRGLYDYRKLTIKFG---KEYGSSQVQLGQTHVMAFVTAQLVQPY 72

  Fly    71 PLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKL 135
            ...|..|....|.:.|..|.|.||.....:.|.||...:..|.....|.:..:||::.|:..|.:
plant    73 KDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRAVDTESLCVLAGKLVWSV 137

  Fly   136 YIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDC------TRIGI 194
            .||:.||:.||||.||.::||.|||...:.|..|           :..||..|.      .|
plant   138 RIDLHILDNGGNLVDAANVAALAALMTFRRPDCT-----------VGGDNSQDVIIHPPEER--- 188

  Fly   195 ETVPLLVTVCKI---------GDYVLVDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAM 250
            |.:||::....|         |..:::||:..||......|.|:|   |....:......|...:
plant   189 EPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTV---NANGDICAIQKPGEEGV 250

  Fly   251 HRDTMRNCLELGLAIGEHLDRLL---TKMLNLEQQRVGLKR 288
            ::..:.:||.|..:......:::   .:..|.|:....:||
plant   251 NQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKR 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	71/289 (25%)
RRP45a	NP_566441.1	RNase_PH_RRP45	11..272	CDD:206773	71/280 (25%)