DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rrp42 and AT3G07750

DIOPT Version :9

Sequence 1:	NP_725517.2	Gene:	Rrp42 / 36766	FlyBaseID:	FBgn0034065	Length:	296	Species:	Drosophila melanogaster
Sequence 2:	NP_001319497.1	Gene:	AT3G07750 / 819966	AraportID:	AT3G07750	Length:	286	Species:	Arabidopsis thaliana

Alignment Length:	284	Identity:	106/284 - (37%)
Similarity:	162/284 - (57%)	Gaps:	16/284 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 VALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDV 68
            :.||..|:.:|..|:..|.|.|||.|..|||:.:|||::..|:||||:|:..||::..||.||..
plant     1 MGLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGR 65

  Fly    69 PNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAY-----ESPLAFNYRTLCLIP 128
            |:.|.|:.||:..|:|||..|.|.|.||||.:|:.||.|:||...     .:....|..:|.:..
plant    66 PSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIKE 130

  Fly   129 GQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPR--VTATMLDAGITDLIISDNPYDCTR 191
            |:.||.||||.|::...|||.||:..|.||||.||.:|:  |:|.:.|....::.|||..|  .:
plant   131 GKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDEQPEIDISDEEY--LQ 193

  Fly   192 IGIETVPLLVTVCKIGDYVLVDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMR 256
            ....:||::||:.|:|.:.:||.:||||  |.:|..||:|: |....:.|.....|..:....:
plant   194 FDTSSVPVIVTLTKVGTHYIVDATAEEE--SQMSSAVSISV-NRTGHICGLTKRSGSGLDPSVI- 254

  Fly   257 NCLELGLAIGEHLDRLLTKMLNLE 280
              |:: :::.:|:...|...|:.|
plant   255 --LDM-ISVAKHVTETLMSKLDSE 275

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	104/279 (37%)
Rrp42	NP_725517.2	Rrp42	6..277	CDD:225034	104/277 (38%)
AT3G07750	NP_001319497.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	124	1.000	Domainoid score	I1821
eggNOG	1	0.900	-	-		E1_COG2123
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H8994
Inparanoid	1	1.050	176	1.000	Inparanoid score	I1489
OMA	1	1.010	-	-		QHG54644
OrthoDB	1	1.010	-	-		D965225at2759
OrthoFinder	1	1.000	-	-		FOG0001408
OrthoInspector	1	1.000	-	-		oto4135
orthoMCL	1	0.900	-	-		OOG6_103422
Panther	1	1.100	-	-	LDO	PTHR11097
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.840