Protein Alignment Rrp42 and Exosc8

DIOPT Version :9

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_001157042.1
• Gene: Exosc8 / 69639
• MGIID: 1916889
• Length: 280
• Species: Mus musculus
• Alignment Length: 270
• Identity: 73/270 - (27%)
• Similarity: 129/270 - (47%)
• Gaps: 13/270 - (4%)

  Fly    13 YILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPNPLTPEFG 77
            |....::::.|.|||...::|...:..|.:|.|.|||.::|.||.::.|||.|...|....|:.|
Mouse    13 YYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRG 77

  Fly    78 KLEFF----VDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYID 138
            .:.|.    ||.....:..|......:.||.....:.:..::........||:.||:..|.||.|
Mouse    78 YVVFLSVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDLCISPGKLAWVLYCD 142

  Fly   139 ILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLLVTV 203
            ::.|:..||:.||.:.|..|||.|.:||.||... :..:.::.:....|    :.:.|.|:..:.
Mouse   143 LICLDYDGNILDACTFALLAALKNVQLPEVTINE-ETALAEVNLKKKSY----LNVRTNPVATSF 202

  Fly   204 CKIGDYVL-VDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMRNCLELGLAIGE 267
            ....|.:| |||:.|||..||.::.| |:..:|:  |...|..||..:....:::|:...:...:
Mouse   203 AVFDDTLLIVDPTGEEEHLSTGTLTV-VTDEDGK--LCCLHKPGGSGLTGAKLQDCMSRAVTRHK 264

  Fly   268 HLDRLLTKML 277
            .:.:||.:::
Mouse   265 EVSKLLDEVI 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	73/270 (27%)
		Rrp42	6..277	CDD:225034	73/268 (27%)
Exosc8	NP_001157042.1	RNase_PH_RRP43	6..270	CDD:206774	71/264 (27%)
		PRK04282	12..276	CDD:235268	73/270 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2123
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001408
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810