Protein Alignment Rrp42 and exosc8

DIOPT Version :9

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_001007919.1
• Gene: exosc8 / 493300
• XenbaseID: XB-GENE-961980
• Length: 276
• Species: Xenopus tropicalis
• Alignment Length: 263
• Identity: 72/263 - (27%)
• Similarity: 120/263 - (45%)
• Gaps: 23/263 - (8%)

  Fly    23 RCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPNPLTPEFGKLEFFVD--- 84
            |.|||...::|...:..|.::.|.|||.::|.|..:|.|||.|...|....|..|.:...||
 Frog    23 RPDGRELTEFRTTTINVGSITTADGSALVKLGNCTVLCGVKAEFTAPPADAPNKGYVVPNVDLTP 87

  Fly    85 -CSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILILECGGNL 148
             ||:...|   |..|.: ||.....:.:..::........||:..|:..|.||.|::.|:..|||
 Frog    88 LCSSQFRP---GPPGEE-AQVASQFIADVIDNSQMLLKEDLCIAHGKLAWVLYCDLICLDYDGNL 148

  Fly   149 HDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETV--PLLVTVCKIGD-YV 210
            .|....|..|||.|.:||.|.... :.|:.::.:.      |:..::.:  |:..:.....| ::
 Frog   149 LDTCMCALVAALQNVRLPSVKINE-ETGLAEVNLK------TKHALKILKHPVATSFAVFDDTFL 206

  Fly   211 LVDPSAEEE-VCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMRNCLELGLAIGEHLDRLLT 274
            ||||:.||| :.|.:..||:    :....|..|...||.|:..:.::.|:...:...:.:..||.
 Frog   207 LVDPTGEEEGLASGLLTVVT----DEDERLCATRKPGGSALAAEKLQECISRAITRHKEVTNLLQ 267

  Fly   275 KML 277
            :.|
 Frog   268 EAL 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	72/263 (27%)
		Rrp42	6..277	CDD:225034	71/261 (27%)
exosc8	NP_001007919.1	RNase_PH_RRP43	6..266	CDD:206774	69/257 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D447176at33208
OrthoFinder	1	1.000	-	-		FOG0001408
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010