Protein Alignment Rrp42 and exosc9

DIOPT Version :9

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_001006077.1
• Gene: exosc9 / 450057
• ZFINID: ZDB-GENE-041010-180
• Length: 393
• Species: Danio rerio
• Alignment Length: 279
• Identity: 69/279 - (24%)
• Similarity: 126/279 - (45%)
• Gaps: 12/279 - (4%)

  Fly     6 LSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPN 70
            ||..|:.::|..:::..|.|||...|||.:.:..|   ...|...:.|..|.:|..|..|:..|.
Zfish     6 LSNCERLFLLKAIKEKKRLDGRQTYDYRNIKISFG---TDYGCCVVELGKTRVLSQVSCELVPPK 67

  Fly    71 PLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKL 135
            ...|..|.:.|.::.|..|:|.||....|:|...|...|:....:....:..:||::.|::.|::
Zfish    68 DSRPTEGIVFFNLELSPMASPAFEPNRQSELLVTLNRQLERCLRNSKCIDTESLCVVSGEKVWQI 132

  Fly   136 YIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLL 200
            .:|:.:|...|||.||.|:||.:||.:.:.|.|.....|.    .:......|...:.|..:|:.
Zfish   133 RVDVHVLNHDGNLMDAASIAAISALSHFRRPDVAIQGRDV----TVFGPEERDPIPLSIYHMPIC 193

  Fly   201 VTVCKI--GDYVLVDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMRNCLELGL 263
            |:....  |.::||||...||......:|:::   |....:.....:||..:.::.:..|.::..
Zfish   194 VSFAFFLQGSFLLVDPCEREERVKDGLLVIAM---NKHREICSIQSSGGIMLLKEQVLRCSKIAS 255

  Fly   264 AIGEHLDRLLTKMLNLEQQ 282
            .....:..|:.|.|..:::
Zfish   256 VKVSEITELINKALENDKK 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	68/273 (25%)
		Rrp42	6..277	CDD:225034	68/272 (25%)
exosc9	NP_001006077.1	Rrp42	1..271	CDD:225034	69/274 (25%)
		ARE binding. /evidence=ECO:0000250|UniProtKB:Q06265	1..268		67/271 (25%)
		RNase_PH_RRP45	6..264	CDD:206773	66/267 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2123
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810