Protein Alignment Rrp42 and exosc8

DIOPT Version :9

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: NP_001002865.1
• Gene: exosc8 / 323016
• ZFINID: ZDB-GENE-030131-1736
• Length: 277
• Species: Danio rerio
• Alignment Length: 260
• Identity: 75/260 - (28%)
• Similarity: 122/260 - (46%)
• Gaps: 9/260 - (3%)

  Fly    18 VEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPNPLTPEFGKLEFF 82
            ::::.|.|||...::||..|....:|.|.|||.:::.||.::.|:|.|:.||.......|.|...
Zfish    18 LKENCRPDGRELGEFRPTTLNINSISTADGSALVKIGNTTVICGIKAELAVPPSEAQNKGYLVPN 82

  Fly    83 VDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILILECGGN 147
            ||.....:..|......:.||.....:.:..||....|...||:...:.||.||.||:.|:..||
Zfish    83 VDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEELCIEKAKLCWVLYCDIMCLDYDGN 147

  Fly   148 LHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLLVTVCKIGD-YVL 211
            |.||......|||...:||.||... :..:.::.|...    .|:.|...|:..:.....| .::
Zfish   148 LLDACITVLLAALKTAQLPEVTINK-ETDLAEVDIEKK----RRLKINRHPVGSSFAVFDDSIII 207

  Fly   212 VDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMRNCLELGLAIGEHLDRLLTKM 276
            |||:||||..||..|.|   :.:.:..|...|..||.::..:.:::|:...|...:.:.:||.|:
Zfish   208 VDPTAEEESLSTALMTV---VTDEEDRLCAVHKPGGTSLSGEKLQHCINRALTRNKEIRKLLDKV 269

  Fly   277  276
            Zfish   270  269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	75/260 (29%)
		Rrp42	6..277	CDD:225034	75/260 (29%)
exosc8	NP_001002865.1	RNase_PH_RRP43	6..266	CDD:206774	72/255 (28%)
		PRK04282	12..269	CDD:235268	74/258 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2123
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D447176at33208
OrthoFinder	1	1.000	-	-		FOG0001408
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.820