Protein Alignment Rrp42 and Exosc8

DIOPT Version :9

• Sequence 1: NP_725517.2
• Gene: Rrp42 / 36766
• FlyBaseID: FBgn0034065
• Length: 296
• Species: Drosophila melanogaster
• Sequence 2: XP_006232394.1
• Gene: Exosc8 / 295050
• RGDID: 1306169
• Length: 276
• Species: Rattus norvegicus
• Alignment Length: 266
• Identity: 70/266 - (26%)
• Similarity: 125/266 - (46%)
• Gaps: 9/266 - (3%)

  Fly    13 YILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEIDVPNPLTPEFG 77
            |....::::.|.|||...::|...:..|.:|.|.|||.::|.||.::.|||.|...|....|:.|
  Rat    13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPVDAPDRG 77

  Fly    78 KLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILIL 142
            .:...||.....:..|......:.||.....:.:..|:........||:.||:..|.||.|::.|
  Rat    78 YVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVIENSQIIKKEDLCISPGKLAWVLYCDLICL 142

  Fly   143 ECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLLVTVCKIG 207
            :..||:.||.:.|..|||.|.:||.||... :..:.::.:....|    :.:...|:..:.....
  Rat   143 DYDGNILDACTFALLAALKNVQLPEVTINE-ETALAEVNLKKKSY----LNVRANPVATSFAVFD 202

  Fly   208 DYVL-VDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAMHRDTMRNCLELGLAIGEHLDR 271
            |.:| |||:.|||..||.::.|   :.:.:..|...|..||..:....:::|:...:...:.:.:
  Rat   203 DTLLIVDPTGEEEHLSTGTLTV---VMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSK 264

  Fly   272 LLTKML 277
            ||.:::
  Rat   265 LLDEVI 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rrp42	NP_725517.2	RNase_PH_RRP42	5..278	CDD:206772	70/266 (26%)
		Rrp42	6..277	CDD:225034	70/264 (27%)
Exosc8	XP_006232394.1	RNase_PH_RRP43	6..266	CDD:206774	68/260 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D447176at33208
OrthoFinder	1	1.000	-	-		FOG0001408
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920