DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8389 and slc16a12

DIOPT Version :10

Sequence 1:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_989310.1 Gene:slc16a12 / 394932 XenbaseID:XB-GENE-1012784 Length:473 Species:Xenopus tropicalis


Alignment Length:472 Identity:102/472 - (21%)
Similarity:187/472 - (39%) Gaps:76/472 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTFTAALITNLNSLALNFSGLFIGP 74
            ||||:||::|.....:.:..:::.......||.......:|....|.|.::    ::.|.:...|
 Frog    13 PDGGWGWMIVIGCFFVTVCTRAVTRCISIFFVEFQSYFAQDYARTAWIHSI----VDCSTMLCAP 73

  Fly    75 AIKSFKPRNVAA-----TGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPSTFMAINSY 134
             |.|:...:.:.     .|.:|.:.||.|.:||:...:..|......|.|..|........:..|
 Frog    74 -IGSYVSNHFSCQVGIILGGVLASTGLVLSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKY 137

  Fly   135 FTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFRYAVLSM----SSLSLFGLFGAAFLKPLN 195
            |..::..|.|::::|:|:|..::..:|:.|::...:|.|:|.:    |:|.:.|    |.::|:.
 Frog   138 FEKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVSNLCVCG----ALMRPIT 198

  Fly   196 PPAKHNNRKHIRLLTEADGEKTSPLQVVIVPTNQSKIERSPP---NVDTLCSRMGQ-----RLVQ 252
              .|.::..:                    |..|.::|..|.   .:|:.||.:.|     ||..
 Frog   199 --LKEDSLHY--------------------PLKQEQMENEPTQSGRLDSSCSPLCQDCSHKRLCY 241

  Fly   253 AMDLE---LLKDLVFWSIIVGMALVYTATINFTMIFPGFLGQTAQLNSQMVAFCMSLVAGADIVF 314
            ....|   |||.......:..:.|.|..:..|..:.|..|  ...:::|..||.||::...|||.
 Frog   242 CTKKEYSFLLKPKFMVLAVSFLFLAYGCSPPFVYLVPYAL--NVGVSNQEAAFLMSILGIIDIVG 304

  Fly   315 RLLLPIVTD------HLRIPYRVVFLIGIVGLFVARCVLAENQTLPV------IITMSVLTGMMK 367
            .:....|||      |....|.:.  :|:.||    |.|    .||:      ::..||:.|...
 Frog   305 NITFGWVTDTRFLKKHRYCCYLIA--VGLDGL----CCL----FLPILTRFQLLVPFSVMFGYFD 359

  Fly   368 SATVINNNLTISAHCRSEKLAGGLGLSMMSKGVIVITVGQLLGWVRDYADSYLICLYAQGV-ILL 431
            .|.|....:.......:..|:..||:......|..:....:.||:.|....|.......|. ::.
 Frog   360 GAYVALIPVVTGDVVGTSSLSSALGVVFFLHAVPYLVSPPIAGWLVDTTGDYTAAFLLSGFSMIF 424

  Fly   432 VVVLVWTPEILYRHRRQ 448
            ..||:...:|:.|.:::
 Frog   425 CAVLLALAKIINRIKKR 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8389NP_611076.2 MFS_MCT_SLC16 15..440 CDD:340910 96/457 (21%)
slc16a12NP_989310.1 MFS_MCT12 18..433 CDD:340982 96/457 (21%)

Return to query results.
Submit another query.