DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8389 and chk

DIOPT Version :9

Sequence 1:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001163063.1 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster


Alignment Length:179 Identity:52/179 - (29%)
Similarity:89/179 - (49%) Gaps:10/179 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VPDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTFTAALITNLNSLALNFS-GLFI 72
            :|||||||:||.|..::::....:...||.:.|..|:...|.|...|.|:     :|.|| .|.:
  Fly   132 MPDGGYGWVVVFASLVVSLIADGLSFSFGLINVELLEYFGESTSKTAWIS-----SLFFSVPLLM 191

  Fly    73 GP----AIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPSTFMAINS 133
            ||    .:..:..|.:...|.::.|.|.||.:|.:.....::.:....|.|||:...:..::|..
  Fly   192 GPIWSNLVDKYGCRKMTILGGVVSAFGFALSSFCNSIEMLMVTFGIISGLGLGIGYVTAVVSIAF 256

  Fly   134 YFTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFRYAVLSMSSLSL 182
            :|..||..|.|:..:|.|:|..:...|..||::::|:|.|.|.:....|
  Fly   257 WFDKKRTFATGIGASGTGIGTFVYARLTSYLIESYGWRGATLILGGTML 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8389NP_611076.2 MFS 19..425 CDD:119392 44/169 (26%)
MFS_1 19..400 CDD:284993 44/169 (26%)
chkNP_001163063.1 MFS 143..>315 CDD:119392 43/168 (26%)
MFS <685..869 CDD:119392
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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