DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8389 and hrm

DIOPT Version :9

Sequence 1:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster


Alignment Length:641 Identity:137/641 - (21%)
Similarity:230/641 - (35%) Gaps:206/641 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVQSSRVVPDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTFTAALITNLNSLALN 66
            |.:...|.||||:||:|:....|.|:.....:..||.||.............||.|..|    ..
  Fly    42 DKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPAL----CY 102

  Fly    67 FSGLFIGP-----AIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPS 126
            |....:||     ::| :..|.|...|....:||:.|..:||......:.|...||.|.||..|.
  Fly   103 FLYSSLGPVSSILSVK-YSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPP 166

  Fly   127 TFMAINSYFTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFRYAVLSMSSLSLFGLFGAAFL 191
            |...:.|||...||.|.|:.::|:.||.:::|.|:|:||:.:|:..:.|.|..::|.....|.|.
  Fly   167 TVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFY 231

  Fly   192 KPL--------------------------------------------------NPPA-------- 198
            :|:                                                  :||:        
  Fly   232 EPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDE 296

  Fly   199 -----------------------KHNNRK---HIRL----LTEADGEKTSPLQVVIVP------- 226
                                   :..:||   .:||    .|...|:..|...:..||       
  Fly   297 RLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSN 361

  Fly   227 ------TNQSKIERSPPNVDT-------------------LCSRMGQRLV--------------- 251
                  :::|::.:..|:..:                   ..|.:..|.:               
  Fly   362 KLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQD 426

  Fly   252 ----------QA--------MDLELLKDLVFWSIIVG---MALVYTATINFTMIFPGFLGQTAQL 295
                      ||        .||.||||.::..|::.   .|:.||   ||.::.|.| |:....
  Fly   427 GSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYT---NFIILLPSF-GEARGF 487

  Fly   296 NSQMVAFCMSLVAGADIVFRLLLPIVTDHLRIPYRVVFLIGIVGLFVARCVLAENQTLPVIITMS 360
            |..:.|:.:|:|:..|::.|:....::|...|| :..:.:|  ||.::...||   .||...|.|
  Fly   488 NKSLSAYLLSVVSATDLIGRIGGSALSDMGYIP-KTWYFVG--GLSISGLSLA---LLPFAWTYS 546

  Fly   361 ------VLTGMMKSATVINNNLTISAHCRSEKLAGGLGLSMMSKGVIVITVGQLLG------W-- 411
                  .|.|:.....|....:.::....:|:|....|:|:...|::     ||:|      |  
  Fly   547 SVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLL-----QLVGPPLCNYWFE 606

  Fly   412 -VRDYADSYLICLYAQGVILLVVVLVWT--PEILYRHRRQRCATNKSMETQSIDAA 464
             |.||...:    :|.|:.||....:|:  |.|    .|::....:.::.|...||
  Fly   607 AVNDYNPLF----HALGLTLLAGASLWSFMPWI----NRRKANAEEQLDAQIEKAA 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8389NP_611076.2 MFS 19..425 CDD:119392 117/581 (20%)
MFS_1 19..400 CDD:284993 109/547 (20%)
hrmNP_001286141.1 2A0113 49..653 CDD:273325 133/631 (21%)
MFS 59..>234 CDD:119392 51/179 (28%)
MFS <449..633 CDD:119392 52/202 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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