DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8389 and mct-3

DIOPT Version :9

Sequence 1:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_510308.1 Gene:mct-3 / 181497 WormBaseID:WBGene00010834 Length:596 Species:Caenorhabditis elegans


Alignment Length:595 Identity:121/595 - (20%)
Similarity:208/595 - (34%) Gaps:175/595 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQEDTF-----TAALITNLNSLALNFSG 69
            |||||||.:|||..|:||....::...|::    ||.....:|     :||:..::.|....|:|
 Worm    34 PDGGYGWAIVAASFLLNMIVDGVIFTVGKI----LQPAWVHSFGISEASAAMTMSILSGCYFFAG 94

  Fly    70 LFIGPAIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPSTFMAINSY 134
            .........|..|.||..|.::.|||..|...|...:...:.:....|.|.|::.....:.|:.|
 Worm    95 PIASVLCNVFGCRQVALAGSLIAALGFLLSISAPNIYVLYVSFGLIAGAGFGMMYLPAIVIISQY 159

  Fly   135 FTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHG--FRYAVLSMSSLSLFGLFGAAFLKPLNPP 197
            |..||..|.|:::.|:|:|..:...|...:.|..|  ::..::..:::::.||.....|:||.|.
 Worm   160 FAKKRSVATGIAVCGSGIGTTVFALLNDVVWDFVGGDWKQFLVYTAAVTISGLGACILLRPLKPS 224

  Fly   198 ---------------------------AKHN----------------NRKH---IRLLTEA---- 212
                                       :|||                |..|   |:.:.:|    
 Worm   225 KDQIEKVAKVLEDYEEHKEKVPESPLLSKHNTPFLSSLELHTAGKLENGHHTGSIKSIVDAVSKE 289

  Fly   213 ---------------------------------------------DGEKTSPLQVV--------- 223
                                                         .|:..:|.|.:         
 Worm   290 IEDLNKPLLRKDIFYSGSTTNIAARSRTGTMTREEAAEHQQSLRFRGKVETPQQYLSKADLNAGD 354

  Fly   224 ---IVPTNQSKIERSPPNVDTLCSRMGQRLVQAMDLELLKDLVFWSIIVGMALVYTATINFTMIF 285
               :...|:|||:           .:.|.|.|.:|.|||....|      :.|.::.|:.....:
 Worm   355 NGDVAIANESKIQ-----------EIKQALKQLVDKELLFSPSF------LLLAFSGTLTLCCFY 402

  Fly   286 PGF------LGQTAQLNSQMVAFCMSLVAGADIVFRLLLPIVTDHLRIPYRVV--FLIGIVGL-- 340
            ..|      |.:...|.:...:|.:||:...:||.|:...|:.|...:....|  |.:...||  
 Worm   403 VPFIYLGNHLDKIEGLTTAEKSFTVSLIGVLNIVARIGCGILADRPEVSALAVNNFALIAAGLAT 467

  Fly   341 -----------FVARCVLAENQTLPVIITMSVLTGMMKSATVINNNLTISAHCRSEKLAGGLGLS 394
                       |:|.||       |..|.::....:.....|....|        |||:...|:.
 Worm   468 MTVPLYTAYWQFLAFCV-------PFSIGVACFAALRSIIVVELIGL--------EKLSNAFGIL 517

  Fly   395 MMSKGVIVITVGQLLGWVRDYADSYLICLYAQGVILLVVVLVWTPEILYRHRRQRCATNKSMETQ 459
            :...||..:....|...::||..::....|..|.::.:...:..|  |...|::..|.:.|.:.:
 Worm   518 LTFMGVGAVVGSPLAAAMKDYTGNFDTSFYVMGALMTISGAMCIP--LGGLRKRELARSDSSDAK 580

  Fly   460 SIDAAEVAKL 469
            .  |.|:.||
 Worm   581 K--AIELQKL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8389NP_611076.2 MFS 19..425 CDD:119392 103/540 (19%)
MFS_1 19..400 CDD:284993 98/515 (19%)
mct-3NP_510308.1 MFS_MCT_SLC16 39..563 CDD:340910 108/561 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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