DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8389 and gem-1

DIOPT Version :9

Sequence 1:NP_611076.2 Gene:CG8389 / 36764 FlyBaseID:FBgn0034063 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001379120.1 Gene:gem-1 / 181458 WormBaseID:WBGene00008214 Length:771 Species:Caenorhabditis elegans


Alignment Length:283 Identity:65/283 - (22%)
Similarity:114/283 - (40%) Gaps:51/283 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVPDGGYGWIVVAAVALINMTNQSILSVFGQLFVGELQKMQE--------DTFTAALITNLNSLA 64
            |..||||||:||.|..|::.........||.:||    |:||        ...||::..:|..:.
 Worm    65 VYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFV----KIQEHFQCGRFVSMITASMFLSLPLIM 125

  Fly    65 LNFSGL---FIGPAIKSFKPRNVAATGCILVALGLALCAFASESWHFILGYSFFVGFGLGLISPS 126
            ...:|:   .:|..:......::....||       :..|.|..:.|::.:....|.|:..|..:
 Worm   126 SPVAGIVSDILGCRMSIIIGASICTVSCI-------IAMFCSHIFFFMISFGLGCGVGMSFIYNA 183

  Fly   127 TFMAINSYFTTKRGRAVGVSLAGAGLGQVLIPHLVRYLLDNHGFRYAVLSMSSLSLFGLFGAA-- 189
            ..:.:..||..:||.|...:::|.|:|.|:.|     :|.|....|....:|.:.:..:|.|.  
 Worm   184 AIVIVTYYFEKRRGLATSFAVSGTGVGTVIYP-----ILLNLSMIYLASFVSDIRIILIFFAVMY 243

  Fly   190 --------FLKPLNPPAKHNN---RKHIRLLTEADGEK---TSPLQVVIVPTNQSKIERSPPNVD 240
                    |:|.:...:...:   ||..:.:.:.|.||   |:|....:      :...|.||::
 Worm   244 FVIAVIGFFIKDVEWESDKTDFKLRKFQKYIAKMDDEKENNTNPTDAFM------RHAISLPNLN 302

  Fly   241 TLCSRMG--QRLVQAMDLELLKD 261
            .|.:..|  |.:..|...|...|
 Worm   303 ILNNHSGSIQSICDAAKAERKSD 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8389NP_611076.2 MFS 19..425 CDD:119392 57/272 (21%)
MFS_1 19..400 CDD:284993 57/272 (21%)
gem-1NP_001379120.1 MFS 72..>254 CDD:421695 43/197 (22%)
MFS <543..727 CDD:421695
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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