DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8388 and znf1068

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001104669.1 Gene:znf1068 / 569852 ZFINID:ZDB-GENE-080215-12 Length:419 Species:Danio rerio


Alignment Length:402 Identity:100/402 - (24%)
Similarity:167/402 - (41%) Gaps:30/402 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 KVAQQDAREELKSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDFLPDDCISKEGAEDPEVLEK 183
            |...:|.:.|....::|.:|.|      :.||.:  :.|:..:|:.:.:    |:..:..|....
Zfish     5 KEESEDVKIEETFTVKQEDLQE------QTDLMV--LKEETHQQNKMEE----KQFEKHQETTTD 57

  Fly   184 KPPTLKRKVSGRSRGRRRVQLAERPNTSCLPKIQKSQEFNDYIREHYKVQCHICNLPMEDF---S 245
            :.|||.:|.|.|.|.|:...........|..:.::......::|.|...:.:.|....:.|   .
Zfish    58 EKPTLTKKTSSRRRPRKSESACNLTCRQCGNRFRRKHNLQIHMRIHTGEKPYTCQQCGQCFCTSG 122

  Fly   246 EMLAHVRREHKQRGYAMC--CNRKFLKRGVLVDHLRRHQDPETFKCSICGRVMGHRRSLELHMRM 308
            .::.|:|....::.|: |  |.:.|...|.|..|:|.|.....:.|..||:......:|..|||:
Zfish   123 NLVVHMRLHTGEKPYS-CPQCGKSFKHNGNLKVHMRTHTGERPYTCQQCGQCFYTTGNLAAHMRI 186

  Fly   309 HEIKSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLN 373
            |   :..|.|.|:||.|:||.:.....|...|.....:  .|..|.|::.....:..|:: :|..
Zfish   187 H---TGERPYTCQQCGKSFYQSANLAAHMRIHTGERPY--TCQQCGKSFYQSANLVVHMR-IHTG 245

  Fly   374 LYAKICDVCGKSIRGREALARHMEEHTGGPQAAIKCHLCDSMLTTKYGLARHIKMMHTAENLQPM 438
            .....|..||||.:....|..|:..|.||  .:..|..|......|..|..|:: :||.|  :|.
Zfish   246 ERPYSCPQCGKSFKQNSNLEAHIRTHNGG--RSFTCPQCGKSFAQKQDLDLHMR-IHTGE--KPY 305

  Fly   439 QCEFCLKICPSLQAHQHHIKYTHNTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQT 503
            .|..|.|......|..:|: .:|...:...|..|.|:|.....||.||..|||.:::||..|.::
Zfish   306 TCTECGKSFRCKSALNNHM-ISHTGEKPFTCAQCGKSFTTKTSLKNHMNGHTGTIVFTCDQCGKS 369

  Fly   504 FNSNANMHAHRK 515
            ......:..|.|
Zfish   370 LTRKDTIRNHMK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368 6/16 (38%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 5/20 (25%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..515 CDD:275368 3/17 (18%)
znf1068NP_001104669.1 C2H2 Zn finger 83..103 CDD:275368 2/19 (11%)
COG5048 107..>411 CDD:227381 77/288 (27%)
C2H2 Zn finger 111..131 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 7/19 (37%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 4/20 (20%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 5/20 (25%)
C2H2 Zn finger 307..327 CDD:275368 5/20 (25%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.