DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and Zfp462

DIOPT Version :9

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:749 Identity:131/749 - (17%)
Similarity:226/749 - (30%) Gaps:251/749 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IEFASEEADSLGLRCIIEKHFWLQIP---------------DSKRAGYV--CGPCWEQLLLFHNF 64
            :|..:::.:.|..|||  |.|.|...               |.||...:  .||      .|.|.
  Rat  1832 VEGEAQDIEWLPFRCI--KCFKLSFSTAELLCMHYTDHHSRDLKRDFVILGSGP------RFQNS 1888

  Fly    65 YLNVEQAHKALEQTVLKETSPPEVVASALEEHIVKSEHDDSVAAAVKRRRGRPRKVAQQDAREEL 129
            ....:.....|:.|            :.|..|:  :.|::......||:..|.:.:::|...:..
  Rat  1889 TFQCKHCDSKLQST------------AELTSHL--NIHNEEFQKRAKRQERRKQLLSKQKYADGA 1939

  Fly   130 KSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDFLPDDCIS----------------------- 171
                    ..:.|.|.|...|..|..:::::...:....|:.                       
  Rat  1940 --------FADFKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHLRKHVQYGSVPA 1996

  Fly   172 -----KEGAEDPEVLEKKPPTLKRKVSGRSRGR---------RRVQLAERPN----TSCLPKIQK 218
                 |:.||||..|........|..||...||         ..::...||.    :.|...:..
  Rat  1997 VSAAVKQEAEDPSHLFLDGFEAARDASGTLVGRVDGGHCLLDGMLEDETRPGGYHCSQCDRVLMS 2061

  Fly   219 SQEFNDYIREHY---------KVQCHICNLPMEDFSEMLAHVRREHKQRGYAMC--CNRKFLKRG 272
            .|....:.|.|.         |..|..|:........:..|::..|.......|  |:.|.....
  Rat  2062 MQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHGHHKPFRCKLCSFKSSYNS 2126

  Fly   273 VLVDH-LRRHQDPETFKCSIC-------GRVMGHRRSLELHMRM-----------------HEIK 312
            .|..| |:.|.....:|||.|       .::..|  ||::|.:.                 |..:
  Rat  2127 RLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEH--SLKVHGKALTLPRPRIVSLLSSHAHHSSQ 2189

  Fly   313 SRGRLYRCEQCSKAFYS---------------AVVYERHKLTHIP-------REQWKVPCTHCE- 354
            ........|..:.:.||               |:.....:::.:|       .||......||| 
  Rat  2190 KATPAEEVEDSNDSSYSEPPDVQQQLNHYQSAALARNNSRVSPVPPSGTAAGTEQKAEAVLHCEF 2254

  Fly   355 KTYPSQY--TMQQHVKLVHLNLYAKICDVCGKSIRGREALARHMEE-HTGGPQAA---IKCHLCD 413
            ..:.|.|  ::::|.:..|.......|..|......:.|...|:|. |:..|:..   ::|.|| 
  Rat  2255 CEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLC- 2318

  Fly   414 SMLTTKY--GLARHIKMMHTAENLQPMQ----------------CEFCLKICPSLQAHQHHIKYT 460
             :..|||  .:..|| ::|..|.:.|::                |:.|...|.|.::.|.||: .
  Rat  2319 -LYHTKYKRNMIDHI-VLHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIE-K 2380

  Fly   461 HNTARSHQCPMCEKAFKRPNELKEHM--------------------------------------- 486
            ||..|.::|.:|....|...||..|:                                       
  Rat  2381 HNELRPYKCQLCYYETKHTEELDTHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKD 2445

  Fly   487 -----TTHTGEVL--------------YTCPHCPQTFNSNANMHAH---------------RKKV 517
                 .|...|::              :.|..|.:.|:..:....|               |.::
  Rat  2446 DEMSSKTEDRELMRFSDRGAGVNTEKRFPCEFCGRAFSQGSEWERHVLRHGMALHDTDQVSRDEI 2510

  Fly   518 HRKEW-EENRHKRLNRSRKSDTIIAVSVRKTTET 550
            |.||. |::.......:::.|..|.:.....:||
  Rat  2511 HTKEMVEDSMQLPSIEAKEDDEPIGIDFPLKSET 2544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD <21..77 CDD:285071 15/72 (21%)
C2H2 Zn finger 264..281 CDD:275368 5/17 (29%)
C2H2 Zn finger 289..309 CDD:275368 7/43 (16%)
C2H2 Zn finger 320..340 CDD:275368 4/34 (12%)
C2H2 Zn finger 350..369 CDD:275368 6/21 (29%)
C2H2 Zn finger 440..461 CDD:275368 7/20 (35%)
C2H2 Zn finger 469..489 CDD:275368 6/63 (10%)
C2H2 Zn finger 497..515 CDD:275368 4/32 (13%)
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 3/19 (16%)
zf-H2C2_5 2084..2108 CDD:404746 3/23 (13%)
C2H2 Zn finger 2086..2106 CDD:275368 3/19 (16%)
C2H2 Zn finger 2115..2136 CDD:275368 6/20 (30%)
C2H2 Zn finger 2144..2165 CDD:275368 6/22 (27%)
C2H2 Zn finger 2315..2335 CDD:275368 8/22 (36%)
C2H2 Zn finger 2361..2381 CDD:275368 7/20 (35%)
C2H2 Zn finger 2389..2410 CDD:275368 6/20 (30%)
C2H2 Zn finger 2475..2495 CDD:275368 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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