DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and CG30020

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:249 Identity:63/249 - (25%)
Similarity:101/249 - (40%) Gaps:48/249 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 IKSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNL- 374
            ::|..||:|         |::        ||        |..|.:|:.....:.:|...:|.|. 
  Fly  1075 LRSNSRLHR---------SSI--------HI--------CKLCNQTFDELGKLVKHEMELHSNTE 1114

  Fly   375 -----YAKICDVCGKSIRGREALARHMEEHTGGPQAAIKCHLCDSMLTTKYGLARHIKMMHTAEN 434
                 |...|.:|..|.|....|..||:.|:....   :|.||.....|...|.||.|..|:.: 
  Fly  1115 RSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKS---QCKLCPKSFVTIAELERHTKAKHSKD- 1175

  Fly   435 LQPMQCEFCLKICPSLQAHQHHI----KYTHNTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLY 495
             :.::|  .:..|....|.:||:    |.:|.:.| :.||:|.|..|....||.||:.|.||:.|
  Fly  1176 -KTLRC--FMDGCRKTFAFKHHLIRHQKASHLSTR-YICPVCNKEEKSNVHLKNHMSVHKGEITY 1236

  Fly   496 TCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRL-----NRSRKSDTIIAVSV 544
            .||.|.:::.....:..|...:|...:.......|     |::|.:|..:|..|
  Fly  1237 KCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGNLSSLATNQARPNDLKVATPV 1290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 320..340 CDD:275368 1/19 (5%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 6/24 (25%)
C2H2 Zn finger 469..489 CDD:275368 9/19 (47%)
C2H2 Zn finger 497..515 CDD:275368 4/17 (24%)
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368
C2H2 Zn finger 758..777 CDD:275368
C2H2 Zn finger 1089..1110 CDD:275368 4/20 (20%)
C2H2 Zn finger 1124..1144 CDD:275368 7/19 (37%)
C2H2 Zn finger 1151..1172 CDD:275368 8/20 (40%)
C2H2 Zn finger 1180..1203 CDD:275368 6/24 (25%)
C2H2 Zn finger 1210..1230 CDD:275368 9/19 (47%)
C2H2 Zn finger 1238..1254 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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