DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8388 and si:dkeyp-84f3.5

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_001313282.1 Gene:si:dkeyp-84f3.5 / 334144 ZFINID:ZDB-GENE-050208-162 Length:580 Species:Danio rerio


Alignment Length:345 Identity:65/345 - (18%)
Similarity:112/345 - (32%) Gaps:86/345 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 QDPETFKCSICGRVMGHRRSLELHMRMHEIKSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQW 346
            ::|..:||..||::....:||.||.:...::..   ::|..|.|........:.|...|.....:
Zfish   110 KEPALYKCDRCGQLFKTSKSLHLHQQYRALEQG---FKCTLCCKVLNDRESLQNHLQNHAHERFY 171

  Fly   347 KVPCTHCEKTYPSQYTMQQHVKLVHLNLYAKI-----------------CDVCGKSIRGREALAR 394
            .  |.||.|.:..|.::..|.|..|.:..::|                 |..||........|..
Zfish   172 S--CGHCGKRFLRQDSLLSHQKQWHGSASSRILSRSQEDQENSMDRSYPCKSCGLRFFWLSDLQS 234

  Fly   395 HMEEHT---GGPQAAIK------------------------CHLCDSMLTTKYGLARHIKMMHTA 432
            |:..|:   ..|...::                        |.||.........|..|.|:.|  
Zfish   235 HLNSHSRVNKSPNEVMQDQALGEENRKIDDNSVISQFNEPCCGLCGQNFLNTSDLREHHKVEH-- 297

  Fly   433 ENLQPMQCEFCLK---ICPSLQAHQHHIKYTHNTARSHQ-------------------------C 469
                |.:.|  :|   :.|:....|:|....|..|:.|:                         |
Zfish   298 ----PDEIE--VKDSSVLPAKAKQQYHGVMRHMVAKQHKQLLRVNIKGKPKRINRATYTGKLFSC 356

  Fly   470 PMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSR 534
            ..|.:.|...:.|..||..|.| .|:.|.:|.:.|....::..|....|..|.:....:......
Zfish   357 KHCHRVFVHSSSLSRHMRYHKG-TLHACVYCGRHFPQRCDVTRHVAMYHASELQSKSQEESTMEH 420

  Fly   535 KSDTIIAVSVRKTTETRQDG 554
            ::.......::::|:|..||
Zfish   421 ETGNGEQEPMKESTQTTSDG 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 4/19 (21%)
C2H2 Zn finger 350..369 CDD:275368 6/18 (33%)
C2H2 Zn finger 440..461 CDD:275368 5/23 (22%)
C2H2 Zn finger 469..489 CDD:275368 6/19 (32%)
C2H2 Zn finger 497..515 CDD:275368 4/17 (24%)
si:dkeyp-84f3.5NP_001313282.1 C2H2 Zn finger 117..137 CDD:275368 7/19 (37%)
C2H2 Zn finger 145..165 CDD:275368 4/19 (21%)
C2H2 Zn finger 173..194 CDD:275368 7/20 (35%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
C2H2 Zn finger 276..297 CDD:275368 6/20 (30%)
zf-C2H2 354..376 CDD:395048 6/21 (29%)
C2H2 Zn finger 356..376 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..400 CDD:275368 3/16 (19%)
C2H2 Zn finger 475..494 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.