DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and Xaf1

DIOPT Version :9

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_006533630.1 Gene:Xaf1 / 327959 MGIID:3772572 Length:315 Species:Mus musculus


Alignment Length:256 Identity:55/256 - (21%)
Similarity:95/256 - (37%) Gaps:59/256 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 CEQCSK--AFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNL-----YAK 377
            |..|.:  |....:::|.|.|..|      |.|..||:..| :..|::|:::||...     :..
Mouse     8 CRNCKRNVASLHFMLHEAHCLRFI------VLCPECEEPIP-ESKMKEHMEVVHQQTKESQQHPA 65

  Fly   378 ICDVCGKSIRGREALARHMEEHTGGPQAAIKCHLCDSMLTTKYGLARHIKMMHTAENL------- 435
            .|..|..::: ...|..| |.|.|  .....|..|:..:|.:. |::|..|..:|:..       
Mouse    66 KCKFCELAVQ-LSNLDVH-ESHCG--SRTEHCPHCNQPITLQV-LSQHKAMCLSAKGRPEEGKRI 125

  Fly   436 -----QPMQCEFCLKICPSLQAHQHHIKYTHNTARSH--QCPMCEKAFKRPNELKEHMTTHTGEV 493
                 :..:|:.|.::.|            .||..||  ||       ..||.    :|....|.
Mouse   126 VSSPGRKTRCDLCKQMIP------------ENTYASHMKQC-------SAPNT----VTRIRDES 167

  Fly   494 LYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRLNR-SRKSDTIIAVSVRKTTETRQD 553
            :...|......:|........|.|..|  .:||:....| ::|.:..:|:.::...:.|.|
Mouse   168 IIVIPSTLAFMDSGNRRSTVSKDVRPK--TKNRNSSTKRETKKQNGTVALPLKSGLQQRAD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD <21..77 CDD:285071
C2H2 Zn finger 264..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 320..340 CDD:275368 6/21 (29%)
C2H2 Zn finger 350..369 CDD:275368 6/18 (33%)
C2H2 Zn finger 440..461 CDD:275368 3/20 (15%)
C2H2 Zn finger 469..489 CDD:275368 4/19 (21%)
C2H2 Zn finger 497..515 CDD:275368 2/17 (12%)
Xaf1XP_006533630.1 PLN03086 <1..108 CDD:178635 27/111 (24%)
XAF1_C 228..>260 CDD:376034
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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