DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and Zfp407

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_008770443.2 Gene:Zfp407 / 307213 RGDID:1310645 Length:2255 Species:Rattus norvegicus


Alignment Length:548 Identity:131/548 - (23%)
Similarity:202/548 - (36%) Gaps:118/548 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EQTVL-KETSPPEVVASALEEHIVKSEHDDSVAAAVKRRR-----GRPRKVAQQDAREELKSVLE 134
            |:.|| |...|.::......|.|      ..|...:.|.:     |...||..:...|:||.|..
  Rat  1231 EEKVLDKSPCPGDLDGGHSAESI------SPVVVKIPREQLDLDGGGQSKVGCEQTSEDLKDVQA 1289

  Fly   135 QINLNEIKI-----EFPEADL------------------TIADVLEDQEEQDFLP----DDCISK 172
            ..||...:|     ..||..|                  ||..:  |.:.|....    |..|.:
  Rat  1290 NSNLESKEILMNSQHEPEVILEEDAPASIGTAENNDAYETIISI--DDKGQTMYSFGRFDSSIIR 1352

  Fly   173 EGAEDPEVLEKKPPTLKRKVSGRSRGRRRVQLAERPNTSCLPKIQKSQEFNDYIREHYKVQCHIC 237
            ...||.|::|:  |.....|:|.       :::|.|...|...::|.:.......|..:::|..|
  Rat  1353 IKTEDGELVEQ--PEEGLMVTGG-------KVSELPLKDCAQGLKKKKVEGSSFGESTRIRCDDC 1408

  Fly   238 NLPMEDFSEMLAHVRREH---KQRGYAMCCNRKFLKRGVL------VDHLRRHQD-----PE--- 285
            ....:..|.:..|:..:|   ::..:.:.|.:.|.....|      ..|:|..|.     ||   
  Rat  1409 GFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGA 1473

  Fly   286 TFKCSICGRVMGHRRSLELHMR-MHE----------IKSRGRLYR---------CEQCSKAFYS- 329
            ||||..|.......::|.||:: .||          ::...::.|         |:.|.|...| 
  Rat  1474 TFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSS 1538

  Fly   330 -AVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALA 393
             ::.:..|..||...:.:|  |..|..........:.|||. ||.:....|.|||.:.    .:.
  Rat  1539 NSMAFLAHIRTHTGSKPFK--CKICHFATAQLGDARNHVKR-HLGMREYKCHVCGVAF----VMK 1596

  Fly   394 RHMEEH------TGGP-QAAIKCHLCDSMLTTKYGLARHIKMMHTAENLQPMQCEF--CLKICPS 449
            :|:..|      .|.| :....|||||...|.|:.|..|:| :||.|  :|.:|.:  |.....:
  Rat  1597 KHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHVK-LHTGE--KPFKCTWPTCHYSFLT 1658

  Fly   450 LQAHQHHIKYTHNTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHR 514
            ..|.:.|.: ||...:|..|.:|..|....:.|.:|...||||..:.|..|  .|.|....|..|
  Rat  1659 ASAMKDHYR-THTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDEC--NFASTTQSHLTR 1720

  Fly   515 -KKVHRKE------WEENRHKRLNRSRK 535
             |:||..|      |.:.|.......||
  Rat  1721 HKRVHTGEKPYRCPWCDYRSNCAENIRK 1748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262 1/1 (100%)
C2H2 Zn finger 264..281 CDD:275368 5/22 (23%)
C2H2 Zn finger 289..309 CDD:275368 5/20 (25%)
C2H2 Zn finger 320..340 CDD:275368 5/21 (24%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 4/22 (18%)
C2H2 Zn finger 469..489 CDD:275368 5/19 (26%)
C2H2 Zn finger 497..515 CDD:275368 6/18 (33%)
Zfp407XP_008770443.2 C2H2 Zn finger 523..544 CDD:275368
C2H2 Zn finger 552..574 CDD:275368
C2H2 Zn finger 583..601 CDD:275368
C2H2 Zn finger 1405..1434 CDD:275371 5/28 (18%)
C2H2 Zn finger 1435..1457 CDD:275371 3/21 (14%)
C2H2 Zn finger 1477..1498 CDD:275371 5/20 (25%)
C2H2 Zn finger 1528..1550 CDD:275368 5/21 (24%)
zf-H2C2_2 1546..1567 CDD:463886 6/22 (27%)
C2H2 Zn finger 1558..1578 CDD:275368 5/20 (25%)
C2H2 Zn finger 1586..1606 CDD:275368 6/23 (26%)
C2H2 Zn finger 1619..1639 CDD:275368 10/20 (50%)
zf-H2C2_2 1631..1658 CDD:463886 9/29 (31%)
C2H2 Zn finger 1647..1669 CDD:275368 4/22 (18%)
C2H2 Zn finger 1677..1697 CDD:275368 5/19 (26%)
zf-H2C2_2 1689..1714 CDD:463886 10/26 (38%)
zf-H2C2_5 1703..1727 CDD:404746 9/25 (36%)
C2H2 Zn finger 1705..1725 CDD:275368 7/21 (33%)
zf-H2C2_2 1717..1742 CDD:463886 8/24 (33%)
C2H2 Zn finger 1733..1750 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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