DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and hinf-1

DIOPT Version :9

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:293 Identity:65/293 - (22%)
Similarity:102/293 - (34%) Gaps:81/293 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 CNLPMEDFSEMLAHV----------------------------------------------RREH 255
            |.:|....:|:..||                                              .|.|
 Worm   252 CGMPFNSLTELFDHVGHHIDGVGDVDRIQQNFSNGDKKVVFPCKWTACTQVADSKANLRRHARHH 316

  Fly   256 KQRGYAMC--CNRKFLKRGVLVDH-LRR---HQDPE---TFKCSICGRVMGHRRSLELHMRMHEI 311
            .......|  |.|.|.:|..|.|| |||   .::||   .:.|.:|.:..|..::|.:|:..|.:
 Worm   317 SGEKVLACPFCARFFSRRDKLYDHCLRRTILMKNPEMEDPYLCKLCQKRFGTEKALCMHVTRHLV 381

  Fly   312 KSRGRLYRCEQCSKAFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLN-LY 375
            .     ..|..||..........||.:|...|......|..|.|.:.::..:.:|. :.|.: :|
 Worm   382 S-----LTCPLCSLGLGCRAELHRHLMTKHSRRSKDFKCDTCSKLFFTESELNRHA-VYHSDVMY 440

  Fly   376 AKICDVCGKSIRGREALARHMEEHTGG-PQAAIKCHLCDSMLTTKYGLARHIKMMH--------- 430
            :  |..|.:..:.::.|.:||:||... ..:...|||||...||.:.|.||:...|         
 Worm   441 S--CKHCPEKFKWKKQLMKHMKEHDENFNPSPYTCHLCDRTYTTGFALGRHLTRQHRLQIPYGFS 503

  Fly   431 ------TAENLQPMQCEFCLK-ICPSLQAHQHH 456
                  .|:.|..:|.:...: .....|||.||
 Worm   504 RFTYKKCADGLMRLQTKKLFRGESGEDQAHHHH 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD <21..77 CDD:285071
C2H2 Zn finger 264..281 CDD:275368 10/20 (50%)
C2H2 Zn finger 289..309 CDD:275368 5/19 (26%)
C2H2 Zn finger 320..340 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 5/18 (28%)
C2H2 Zn finger 469..489 CDD:275368
C2H2 Zn finger 497..515 CDD:275368
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 1/16 (6%)
C2H2 Zn finger 324..344 CDD:275368 9/19 (47%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 415..435 CDD:275368 4/20 (20%)
C2H2 Zn finger 442..462 CDD:275368 5/19 (26%)
C2H2 Zn finger 473..494 CDD:275368 10/20 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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