DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and LOC100488006

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 XenbaseID:XB-GENE-29079027 Length:383 Species:Xenopus tropicalis


Alignment Length:400 Identity:106/400 - (26%)
Similarity:156/400 - (39%) Gaps:67/400 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 DQEEQDFLPDDC-ISKEGAEDPEVLEKKPPTLKRKVSGRSRGR---------------RRVQLAE 206
            |:|::|   .|| |.|||.....:..::...:..|:...|.|:               :..::.|
 Frog    13 DEEDKD---GDCIIVKEGETKRGIKTEENTDIGNKLRDPSPGKSCTGANLMVAGGFDQQEAEIKE 74

  Fly   207 ------------RPNTSCLPKIQKSQEFNDYIREHYKVQCHICNLPMEDFSEMLAHVRREHKQRG 259
                        |.|.:....|.|..|.::             |...|..|:|...|::    |.
 Frog    75 YFIENPGNRAKFRINKATWENIHKGSESSE-------------NSLDESESKMDFGVQK----RC 122

  Fly   260 YAMCCNRKFLKRGVLVDHLRRHQDPETFKCSICGRVMGHRRSLELHMRMHEIKSRGRLYRCEQCS 324
            ..:.|.|.|.....|:.|.|.|...:.|:|.:||:....:.||.:|.|:|   :..|.|.|..|.
 Frog   123 VCIDCGRSFSYVSHLIIHRRSHTGEKPFECGMCGKCFARKCSLVIHERIH---TGERPYPCPDCG 184

  Fly   325 KAFYSAVVYERHKLTHIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGR 389
            |.|.|:.....||..|.....:  .|..|.|::.|..::..|.: .|.......|..|||:....
 Frog   185 KRFTSSATLTTHKRIHTGERPY--ICWECGKSFTSNSSLFLHNR-THTGEKPYECKQCGKTFSCS 246

  Fly   390 EALARHMEEHTGGPQAAIKCHLCDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLK--ICPS-LQ 451
            .||..|...|||  :....|..|.........|.:| :..||.|  ....|..|.|  .|.| |.
 Frog   247 SALVTHTRTHTG--EKPYTCAECGKSFFDNSRLLKH-QATHTGE--WAYMCTICGKGFTCISNLN 306

  Fly   452 AHQHHIKYTHNTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKK 516
            .||.    :|...|...|..|.|:|...:.|..|.||||||..|.||.|.:||....::..| :|
 Frog   307 VHQR----SHTGERPFSCGQCGKSFTNNSYLVRHQTTHTGERPYPCPICGKTFTRKGHVVTH-QK 366

  Fly   517 VHRKEWEENR 526
            :|.|:.|:.:
 Frog   367 IHTKKMEKTK 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262
C2H2 Zn finger 264..281 CDD:275368 6/16 (38%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..369 CDD:275368 5/18 (28%)
C2H2 Zn finger 440..461 CDD:275368 8/23 (35%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368 6/19 (32%)
zf-H2C2_2 136..161 CDD:463886 8/24 (33%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
COG5048 <177..327 CDD:227381 45/161 (28%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
C2H2 Zn finger 208..228 CDD:275368 5/20 (25%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 4/20 (20%)
C2H2 Zn finger 292..312 CDD:275368 8/23 (35%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:463886 14/24 (58%)
C2H2 Zn finger 348..368 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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