DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and znf827

DIOPT Version :10

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_002938981.2 Gene:znf827 / 100485396 XenbaseID:XB-GENE-1033048 Length:1318 Species:Xenopus tropicalis


Alignment Length:756 Identity:137/756 - (18%)
Similarity:232/756 - (30%) Gaps:299/756 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EQTVLKET--SPPEVVASALEEHIVKSEHDDSVAAAVKRRRGRPRKVAQQDAREEL------KSV 132
            :.|:|.||  ....:..|||.   :|.|..|:...:|.....||...:....:|.|      .|:
 Frog   483 QMTLLPETLNQINSIAVSALP---IKEEPKDNGCPSVIPFNDRPNSNSSAMMKESLDFVGCPSSL 544

  Fly   133 LEQINLNEIKIEF------------PEADLTIADVLEDQEEQDFLPDDCIS----------KEGA 175
            ..|    :|.::.            .:..||:...::| |.:|..|...:|          .||.
 Frog   545 FSQ----DISVKMASDFLMKLSAANQKEPLTLTFKVKD-EPEDEEPISSLSPQSLYGFNQESEGR 604

  Fly   176 ------EDPEVLEKKPPTLKRKVSGRS-------------RGRRRVQLAERPNTSCLPKIQKS-- 219
                  ||.:..|.:|..|.:.:|.::             :..:.|::.|.|....:|....|  
 Frog   605 LSSTPDEDSKPQETQPNLLTQDISMKAASELLMKLSAESCKDTQSVKIKEEPMEVDIPDSSISPR 669

  Fly   220 ----------QEFNDYIREHYKVQCHIC---NLPMEDFSEMLA---------HVRREH------- 255
                      ||.|:::::  ...|.:.   ||..:|.|..:|         .|.:||       
 Frog   670 QNIGYSTLLRQEKNEHLQK--MPLCRVVPEGNLFSQDISVKMASELLFKLSEKVSKEHNHKSNVI 732

  Fly   256 ----------KQRGYAMCCNRKFLKRGVLVDHLRRHQDP----------------ETFKCSICGR 294
                      |.|......|.|.:.:.......|...:|                :.|.|.:||:
 Frog   733 RTTSPFFSEEKCRQSPFTSNSKDIVKNEAFPQGRPDSEPMGLDTSSGIPTWKLSEQLFPCDVCGK 797

  Fly   295 VMGHRRSLELHMRMHEIKSRGRLYRCEQCSKA--------------------------------- 326
            |.|.:::|..|:.:|   :..|.|:|..||.|                                 
 Frog   798 VFGRQQTLSRHLLLH---TEERKYKCHLCSYAAKCRANLNQHLTVHAVKLVSTDTEDIVSAVISE 859

  Fly   327 ---------FYSA----------VVYERHKLTHIPREQW--KVPCTHCEKTYPSQYTMQQHVKLV 370
                     |||.          |.:..|...|:.:|||  .:.|:.|:.....:..|:.|:...
 Frog   860 TSEKKKTPYFYSCHVCGFETELNVQFVSHMSLHVDKEQWMYSICCSTCDFVTMEESDMRTHISTK 924

  Fly   371 H---------------------------------------------------------------- 371
            |                                                                
 Frog   925 HSGEDRKTPSESVSPSSSSLSTLSDSANSKEDSDTPLRNQTSNSLLVISVVPGSQPFVSNEEKSD 989

  Fly   372 -----------------------LNLYAKI--CDVCGKSIRGREALARHMEEHTGGPQAAIKCHL 411
                                   ::|..::  ||||.|.::..|.|..|.:.|| .|...:||..
 Frog   990 KGFECVFCNFVCKTKTMFERHLQIHLITRMYECDVCHKFMKTPEQLTEHKKCHT-VPTGGLKCPF 1053

  Fly   412 CDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQ----HHIKYTHNTARSHQCPMC 472
            |.........:..|:|..:        :.|:..:||.:::|:|    .|:: .|.....::|..|
 Frog  1054 CIYSTNRPAAMECHLKTHY--------KMEYKCRICKTVKANQLELEMHVR-GHRLGNHYKCDQC 1109

  Fly   473 EKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSRKSD 537
            ....|..|:|.||:..||||..:.|..|..:.....|:              |.||:|..|.:..
 Frog  1110 GYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNL--------------NLHKKLKHSPRQT 1160

  Fly   538 TIIAVSVRKTT---------ETRQDGGLVPAEAIATTSSPR 569
            ......:.|||         :..|:|.|:..|....|.:|:
 Frog  1161 FSCEECLFKTTHPFVFSRHVKKHQNGELMEEEKKLPTPAPK 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD 3..78 CDD:462262 0/1 (0%)
C2H2 Zn finger 264..281 CDD:275368 3/16 (19%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 9/71 (13%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 6/24 (25%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..515 CDD:275368 3/17 (18%)
znf827XP_002938981.2 COG5048 360..829 CDD:227381 71/358 (20%)
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 423..443 CDD:275368
C2H2 Zn finger 792..812 CDD:275370 7/19 (37%)
C2H2 Zn finger 820..840 CDD:275370 4/19 (21%)
C2H2 Zn finger 994..1014 CDD:275368 0/19 (0%)
C2H2 Zn finger 1022..1042 CDD:275368 8/19 (42%)
C2H2 Zn finger 1051..1071 CDD:275368 4/19 (21%)
C2H2 Zn finger 1078..1098 CDD:275368 5/20 (25%)
zf-H2C2_5 1104..1128 CDD:404746 8/23 (35%)
C2H2 Zn finger 1106..1126 CDD:275368 7/19 (37%)
zf-H2C2_2 1119..1143 CDD:463886 9/23 (39%)
C2H2 Zn finger 1134..1153 CDD:275368 6/32 (19%)
C2H2 Zn finger 1163..1183 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.

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