DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8388 and znf335

DIOPT Version :9

Sequence 1:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_005167155.1 Gene:znf335 / 100148891 ZFINID:ZDB-GENE-130530-814 Length:1534 Species:Danio rerio


Alignment Length:556 Identity:132/556 - (23%)
Similarity:194/556 - (34%) Gaps:143/556 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KRRRGRPRKVAQQDAREELKSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDFLPDDCISKEGA 175
            ||.||||||       .|.|:....:...|.:.|..|.|:..|..|:||.:.|:.|.|    |.|
Zfish   501 KRGRGRPRK-------SESKAGAVVVVKKEEQPEEEEDDIVDAGALDDQGDSDYKPAD----EEA 554

  Fly   176 ED----------PEVLEKKPPTLKRKVSGRSRG--RRRVQLAERP-------------------- 208
            ..          |......|.:..||...|..|  |:.:..:|.|                    
Zfish   555 RSRLAVSHFTPPPSCSSSSPASTSRKRPRRMVGPPRKFLPDSESPAAPSETNNTEDPQAPEEASS 619

  Fly   209 --------------------------------NTS-----CLPKIQKSQEFNDYIREHYKVQCHI 236
                                            |||     .||| ::.:....::::.||..   
Zfish   620 SGLDNGSSSFSNGTEVEPGVSQSDSENRDPSSNTSPDDLEFLPK-KRGRPSKRFLQKKYKKY--- 680

  Fly   237 CNLPMEDFSEMLAHVRREHKQRGYAMCCNRKFLKRGVLVDHLRRHQ--DPETFKCSICGRVMGHR 299
              :....:...|..:.|.|.    ...|..:||.:..|..|:..|:  |||.:||..|.......
Zfish   681 --MNRNKYYRSLKPLLRPHN----CWICGSRFLSQEDLKFHVDSHEGNDPERYKCLQCSYRCKRW 739

  Fly   300 RSLELHMRMHEIKSRGRLYRCEQCSKAFYSAVVYE---RHKLTHIPREQWKV------------- 348
            .||:.||..||   ..:.|:||.|.   |::|..:   ||...|...:..|:             
Zfish   740 SSLKEHMFNHE---GTKPYKCEMCD---YTSVYKKDVTRHSAVHNKSKSRKIDVSCVNPSQVSKV 798

  Fly   349 ---PCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHMEEHTGG-PQAAIKC 409
               ||..|.:.||.|..:.||:| .|......:||.||||.:.|.....|:..|... ..:..||
Zfish   799 SEFPCPICSRVYPMQKRLTQHMK-THSTEKPHMCDKCGKSFKKRYTFKMHLLTHIQNCGNSLFKC 862

  Fly   410 HLCDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQHHIKYTHNTARSHQCPMCEK 474
            ..||.....|..|..| ::.||  |.:|.:||.|............||...|...:...|.||..
Zfish   863 EFCDYTCNDKKHLLNH-QLSHT--NDKPFKCEECKYSTSKEDFLVSHIAIKHTGEKPFSCEMCHF 924

  Fly   475 AFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEW-----EENRHKRLNRSR 534
            ..:....|:.|:         .|.| |:||...:..|.. :.|.|::.     |:....||....
Zfish   925 TTRHRKNLRLHV---------QCRH-PETFEEWSRTHPD-EPVRRRQTPVFTVEQIEELRLQHET 978

  Fly   535 K--SDTIIAVSVRKTTETRQDGG--LVPAEAIATTS 566
            :  ..||:.|. ..|.:|.:..|  .|..:|:..|:
Zfish   979 QEFQGTIVTVD-PLTLQTMESIGNTSVSQDALGNTT 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8388NP_611075.1 zf-AD <21..77 CDD:285071
C2H2 Zn finger 264..281 CDD:275368 5/16 (31%)
C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
C2H2 Zn finger 320..340 CDD:275368 7/22 (32%)
C2H2 Zn finger 350..369 CDD:275368 7/18 (39%)
C2H2 Zn finger 440..461 CDD:275368 5/20 (25%)
C2H2 Zn finger 469..489 CDD:275368 5/19 (26%)
C2H2 Zn finger 497..515 CDD:275368 6/17 (35%)
znf335XP_005167155.1 COG5048 <592..838 CDD:227381 56/262 (21%)
C2H2 Zn finger 699..719 CDD:275368 5/19 (26%)
C2H2 Zn finger 729..749 CDD:275368 6/19 (32%)
zf-H2C2_2 741..766 CDD:290200 11/30 (37%)
C2H2 Zn finger 803..823 CDD:275368 8/20 (40%)
zf-H2C2_2 816..839 CDD:290200 10/23 (43%)
zf-C2H2 829..851 CDD:278523 8/21 (38%)
C2H2 Zn finger 831..851 CDD:275368 8/19 (42%)
C2H2 Zn finger 862..882 CDD:275368 6/20 (30%)
zf-H2C2_2 874..898 CDD:290200 9/26 (35%)
C2H2 Zn finger 890..911 CDD:275368 5/20 (25%)
C2H2 Zn finger 919..936 CDD:275368 4/16 (25%)
C2H2 Zn finger 1215..1235 CDD:275370
C2H2 Zn finger 1243..1263 CDD:275368
C2H2 Zn finger 1271..1291 CDD:275368
zf-H2C2_2 1283..1308 CDD:290200
C2H2 Zn finger 1299..1320 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577390
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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