DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG8388 and trafd1

DIOPT Version :9

Sequence 1:	NP_611075.1	Gene:	CG8388 / 36763	FlyBaseID:	FBgn0034062	Length:	572	Species:	Drosophila melanogaster
Sequence 2:	NP_001082984.1	Gene:	trafd1 / 100037363	ZFINID:	ZDB-GENE-070410-43	Length:	565	Species:	Danio rerio

Alignment Length:	230	Identity:	47/230 - (20%)
Similarity:	82/230 - (35%)	Gaps:	52/230 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   350 CTHCEKTYP-SQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHME-EHTGGPQAAIKCHLC 412
            |::|:...| :.:|..:    :|......:|:||.:.....| |.:|.| :|.   :...||
Zfish     9 CSNCKHNIPEANFTTHE----IHCRRNIALCEVCQEPFPHAE-LVQHKEMDHA---EEQCKC--- 62

  Fly   413 DSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQHHIKYTHNTARSHQCPMCE-KAF 476
             .:...|..|..| :....:..|.|  |:||.....|.||.:|.   .:...|:..||:|: ...
Zfish    63 -GLKIEKRFLETH-QRSECSHRLVP--CQFCDLELASFQAKEHE---EYCGTRTEPCPVCKCNVM 120

  Fly   477 KRPNEL-----------KEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENR---- 526
            .|...:           :|..::..|      |..|..:....::|...:...|.....|.
Zfish   121 LREQHIHPALCGSLTPPEERHSSRAG------PQSPGAWFETHSIHNLLRAQERSHNNNNTGAAD 179

  Fly   527 --------HKRLNRSRKSDTIIAVSVRKTTETRQD 553
                    ..||:.|.:.  .:....|:.||||.:
Zfish   180 RRGPPRPIEDRLHNSTRG--TVRGGTRRNTETRNN 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8388	NP_611075.1	zf-AD	<21..77	CDD:285071
		C2H2 Zn finger	264..281	CDD:275368
		C2H2 Zn finger	289..309	CDD:275368
		C2H2 Zn finger	320..340	CDD:275368
		C2H2 Zn finger	350..369	CDD:275368	4/19 (21%)
		C2H2 Zn finger	440..461	CDD:275368	7/20 (35%)
		C2H2 Zn finger	469..489	CDD:275368	5/31 (16%)
		C2H2 Zn finger	497..515	CDD:275368	3/17 (18%)
trafd1	NP_001082984.1	PLN03086	<3..127	CDD:178635	32/135 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	0	0.000