DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPCL and ACLA-1

DIOPT Version :9

Sequence 1:NP_001137674.2 Gene:ATPCL / 36760 FlyBaseID:FBgn0020236 Length:1112 Species:Drosophila melanogaster
Sequence 2:NP_001184953.1 Gene:ACLA-1 / 837610 AraportID:AT1G10670 Length:443 Species:Arabidopsis thaliana


Alignment Length:446 Identity:193/446 - (43%)
Similarity:264/446 - (59%) Gaps:35/446 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAKAITEASGKDILNRHLN-------------------THGA-GAATCRFSTVNSTTDWSKLAV 45
            |:.|.|.|...|.::..|..                   .|.. |.:..|...:|.|||.::|..
plant     1 MARKKIREYDSKRLVKEHFKRLSGKELPIRSVQADDVFWLHSCFGFSDIRHHVINETTDLNELVE 65

  Fly    46 DHPWLLTTPLVCKPDQLIKRRGKLGLIGVKKNFEQVKQWIGERLNKDQKIGNAVGKLRNFIIEPF 110
            ..|||.:..||.|||.|..:|||.||:.:|.:|..|..::.|||.|:.::....|.:..||:|||
plant    66 KEPWLSSEKLVVKPDMLFGKRGKSGLVALKLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPF 130

  Fly   111 VPHTDAEEMYVCIYSHRAADTILFYHQGGVDIGDVDAKAVKLDVPVNSSLS---LADVKSKLLKE 172
            |||.  ||.|:.:.|.|...:|.|...||::|.:...|...:.:|..:||:   .|.:.:.|..|
plant   131 VPHN--EEYYLNVVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTPEICAPLVATLPLE 193

  Fly   173 VKDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTADNLYILDLAAKLDSTADFICRPKWGEI 237
            :     |..|.:|:..::|.:.||.||:||:||..:...:.|.||:..:||.||.|....|||:|
plant   194 I-----KAEIEEFIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKWGDI 253

  Fly   238 DYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASEL 302
            ::|.||||...|.|::|..||.|:.||||.|:||..||||||||||||||||:||:.|||.||||
plant   254 EFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 318

  Fly   303 ANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGK--VLITGGGIANFTNVAATFQGIITALRE 365
            .||.||||||.|.:..:||:.:::..|:   :||||  .|:.||||||||:|||||.|||.||:|
plant   319 GNYAEYSGAPKEDEVLQYARVVIDCATA---NPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 380

  Fly   366 FQPKLVEHNVSIFVRRAGPNYQEGLRKMRDFGSTLGIPLHVFGPETHMTAICGMAL 421
            .:.||....:.|||||.|||||:||.|||..|..:|:|:.|:|||..||.||..|:
plant   381 KEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIEVYGPEATMTGICKEAI 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPCLNP_001137674.2 PLN02235 1..421 CDD:177879 192/444 (43%)
ATP-grasp_4 8..208 CDD:302634 70/222 (32%)
Citrate_bind 248..423 CDD:292732 103/176 (59%)
PLN02522 503..1106 CDD:178137
CoA_binding 504..613 CDD:214881
Ligase_CoA 672..796 CDD:304578
CCL_ACL-C 868..1105 CDD:99854
ACLA-1NP_001184953.1 PLN02235 1..443 CDD:177879 193/446 (43%)
ATP-grasp_4 57..222 CDD:302634 62/171 (36%)
Citrate_bind 264..438 CDD:292732 103/176 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 205 1.000 Domainoid score I831
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101446
Panther 1 1.100 - - O PTHR23118
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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