DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPCL and ACLA-3

DIOPT Version :9

Sequence 1:NP_001137674.2 Gene:ATPCL / 36760 FlyBaseID:FBgn0020236 Length:1112 Species:Drosophila melanogaster
Sequence 2:NP_172414.1 Gene:ACLA-3 / 837466 AraportID:AT1G09430 Length:424 Species:Arabidopsis thaliana


Alignment Length:426 Identity:183/426 - (42%)
Similarity:255/426 - (59%) Gaps:15/426 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAKAITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKR 65
            |:.|.|.|...|.:|..||..........|.:.|..:||:::|.....||.:|.||.|||.|..:
plant     1 MARKKIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPDMLFGK 65

  Fly    66 RGKLGLIGVKKNFEQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFVPHTDAEEMYVCIYSHRAAD 130
            |||.||:.:|.:..:|..::..||..:.::......:..||:||||||.  :|.|:.|.|.|...
plant    66 RGKSGLVALKLDLAEVADFVKARLGTEVEMEGCKAPITTFIVEPFVPHD--QEYYLSIVSDRLGC 128

  Fly   131 TILFYHQGGVDIGDVDAKAVKLDVPVNSSLSL---ADVKSKLLKEVKDAGTKERIAKFVSALYTT 192
            ||.|...||::|.:...|...:.:|...|::|   |.:.:.|..||     :.:|..|:...:..
plant   129 TISFSECGGIEIEENWDKVKTIFLPAEKSMTLEVCAPLIATLPLEV-----RAKIGNFIMGAFAV 188

  Fly   193 YVDLYFTYLEINPLVVTADNLYILDLAAKLDSTADFICRPKWGEIDYPPPFGRDAYPEEAYIADL 257
            :.||.|:::|:||..:.....:.||:..:||.||.|....|||:|::|.||||.....|.:|..|
plant   189 FQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFGRVLSSTENFIHGL 253

  Fly   258 DAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGAPSEQQTYEYAK 322
            |.|:.||||.|:||..||||||||||||||||:||:.|||.||||.||.||||||:|::..:||:
plant   254 DEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYAR 318

  Fly   323 TILNLMTSSPKHPDG--KVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVSIFVRRAGPN 385
            .:::..|:.   |||  :.|:.||||||||:|||||.|||.||||.:.:|....:.|:|||.|||
plant   319 VVIDCATTD---PDGRKRALLIGGGIANFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPN 380

  Fly   386 YQEGLRKMRDFGSTLGIPLHVFGPETHMTAICGMAL 421
            ||.||.:||..|..||:||.|:|||..||.||..|:
plant   381 YQTGLARMRALGEELGVPLEVYGPEATMTGICKRAI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPCLNP_001137674.2 PLN02235 1..421 CDD:177879 182/424 (43%)
ATP-grasp_4 8..208 CDD:302634 63/202 (31%)
Citrate_bind 248..423 CDD:292732 101/176 (57%)
PLN02522 503..1106 CDD:178137
CoA_binding 504..613 CDD:214881
Ligase_CoA 672..796 CDD:304578
CCL_ACL-C 868..1105 CDD:99854
ACLA-3NP_172414.1 PLN02235 1..423 CDD:177879 183/426 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 205 1.000 Domainoid score I831
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101446
Panther 1 1.100 - - O PTHR23118
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.810

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