DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPCL and suclg2

DIOPT Version :9

Sequence 1:NP_001137674.2 Gene:ATPCL / 36760 FlyBaseID:FBgn0020236 Length:1112 Species:Drosophila melanogaster
Sequence 2:XP_012816430.1 Gene:suclg2 / 496495 XenbaseID:XB-GENE-956242 Length:431 Species:Xenopus tropicalis


Alignment Length:411 Identity:109/411 - (26%)
Similarity:156/411 - (37%) Gaps:60/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVD-HPWLLTTPLVCKPDQLIKRRGK- 68
            :.|...|.::..|      |....||...::..|    |:| ...|....:|.|...|...||| 
 Frog    39 LQEYQSKKLMADH------GVTVQRFFVADNAND----ALDAAKRLKAREIVLKAQILAGGRGKG 93

  Fly    69 ---LGLIG-------VKKNFEQVKQWIGERLNKDQKIGNAVGKLRNFIIEPFVPHTDAEEMYVCI 123
               .||.|       ..|..|..||.||..|...|.:...|...:..:.|..   ..:.|.|:.|
 Frog    94 TFDSGLKGGVHLTKDPNKVEELTKQMIGYNLTTKQTVAGGVKVHKVMVAEAL---DISRETYLAI 155

  Fly   124 YSHRAAD--TILFYHQGGVDIGDVDAKAVKLDVPVNSSLSLADVKSKLLKEVKDAGTK----ERI 182
            ...||.:  .::...|||:||.:|..|..:|.......:......|:.|:...:.|.|    ::.
 Frog   156 LMDRACNGPVLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLGFKGPLQQQA 220

  Fly   183 AKFVSALYTTYVDLYFTYLEINPLVVTADNLYI-LDLAAKLDSTADFICRPKWGEIDYPPPFGRD 246
            |:.:..||..::.:..|.:|:||...|.:...: .|.....|..|:|  |.|  ||     |..|
 Frog   221 AEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF--RQK--EI-----FAMD 276

  Fly   247 AYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANYGEYSGA 311
            ...|    .|.......|..|..:..:|.|...|.|.|.::...| |.||.|... ||:.:..|.
 Frog   277 DTSE----TDPIENEANSYDLKYIGMDGNIACFVNGAGLAMATCD-IIDLHGGKP-ANFLDLGGG 335

  Fly   312 PSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKLVEHNVS 376
            ..|.|.|:..|    |:|:.||.....|.|.||    ..|.|....||..|.||.:.|     |.
 Frog   336 VKESQVYQAFK----LLTADPKVEAILVNIFGG----IVNCAIIANGITKACRELELK-----VP 387

  Fly   377 IFVRRAGPNYQEGLRKMRDFG 397
            :.||..|.|..|..|.:.:.|
 Frog   388 LVVRLEGTNVHEAKRILAESG 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPCLNP_001137674.2 PLN02235 1..421 CDD:177879 109/411 (27%)
ATP-grasp_4 8..208 CDD:302634 53/217 (24%)
Citrate_bind 248..423 CDD:292732 45/150 (30%)
PLN02522 503..1106 CDD:178137
CoA_binding 504..613 CDD:214881
Ligase_CoA 672..796 CDD:304578
CCL_ACL-C 868..1105 CDD:99854
suclg2XP_012816430.1 sucC 38..430 CDD:234813 109/411 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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