DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPCL and suclg2

DIOPT Version :9

Sequence 1:NP_001137674.2 Gene:ATPCL / 36760 FlyBaseID:FBgn0020236 Length:1112 Species:Drosophila melanogaster
Sequence 2:XP_021328137.1 Gene:suclg2 / 317746 ZFINID:ZDB-GENE-030114-3 Length:453 Species:Danio rerio


Alignment Length:424 Identity:106/424 - (25%)
Similarity:148/424 - (34%) Gaps:106/424 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AGAATCRFSTVNSTTDWSKLAVDHPWLLTTPLVCKPDQLIKRRGK----LGLIGVKKNFEQVKQW 84
            :|.|..||...::.::..:.|   ..|....:|.|...|...|||    .||.|           
Zfish    73 SGVAVQRFFVADTASEALEAA---KRLKAKEIVLKAQILAGGRGKGVFNSGLKG----------- 123

  Fly    85 IGERLNKDQK-IGNAVGKLRNF-IIEPFVPHTDAE--------------EMYVCIYSHRAAD--T 131
             |..|.||.. :|....|:..: :.....|....|              |.|..|...|:.:  .
Zfish   124 -GVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISRETYFAILMDRSCNGPV 187

  Fly   132 ILFYHQGGVDIGDVDAKAVKLDVPVNSSLSLADVKSKLLKEVKD-------------------AG 177
            ::...|||:||.:|.|...:|                :.|||.|                   .|
Zfish   188 MVGSPQGGMDIEEVAAATPEL----------------IFKEVIDIFEGVRDDQALRMAANLGFKG 236

  Fly   178 TKER-IAKFVSALYTTYVDLYFTYLEINPLVVTADNLYI-LDLAAKLDSTADFICRPKWGEIDYP 240
            ..|| .|..:..||..::.:..|.:|:|||..|.:...: .|.....|..|:|  |.|       
Zfish   237 PLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEF--RQK------- 292

  Fly   241 PPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASELANY 305
            ..|..|...|    :|......|...|..:..:|.|...|.|.|.::...| |.||.|... ||:
Zfish   293 AVFSMDDTAE----SDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCD-IIDLHGGKP-ANF 351

  Fly   306 GEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREFQPKL 370
            .:..|...|.|.|...|    |:|:.||.....|.|.||    ..|.|....||..|.||.:.| 
Zfish   352 LDLGGGVKENQVYAAFK----LLTADPKVEAILVNIFGG----IVNCAIIANGITKACRELELK- 407

  Fly   371 VEHNVSIFVRRAGPNYQEGLRKMRDFGSTLGIPL 404
                |.:.||..|.|..|..|.:    |..|:|:
Zfish   408 ----VPLVVRLEGTNVHEAKRIL----SESGLPI 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPCLNP_001137674.2 PLN02235 1..421 CDD:177879 106/424 (25%)
ATP-grasp_4 8..208 CDD:302634 50/225 (22%)
Citrate_bind 248..423 CDD:292732 47/157 (30%)
PLN02522 503..1106 CDD:178137
CoA_binding 504..613 CDD:214881
Ligase_CoA 672..796 CDD:304578
CCL_ACL-C 868..1105 CDD:99854
suclg2XP_021328137.1 sucC 60..441 CDD:234813 106/424 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.