DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8320 and AT2G23940

DIOPT Version :10

Sequence 1:NP_611072.2 Gene:CG8320 / 36759 FlyBaseID:FBgn0034059 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_565558.1 Gene:AT2G23940 / 816926 AraportID:AT2G23940 Length:173 Species:Arabidopsis thaliana


Alignment Length:165 Identity:45/165 - (27%)
Similarity:82/165 - (49%) Gaps:8/165 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KGAKQIVEENKTTLTFYRNMAIGCAAPALLLSFLVFEVTKTSVFMHILSLLILGSSYQF----MA 72
            :|||:..|||...:...|.:.|...|...::..|:|..:.|  :.|.:.|:|...:|.|    :.
plant     4 QGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFT--WKHWIGLVITSLAYAFPYKQLD 66

  Fly    73 FMSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIRAGWML 137
            .|::...::.|.|:|.|.|:. .|||...:.|:|.:|....|.::|:..||...|:.|....:..
plant    67 QMAKPSVTDDGELIDGGFDMT-TGGICGYLHDVIYITCFVQLASIITGKFWYTYLVIPAFGVYKA 130

  Fly   138 WGSVIQPWLSQRNAQDDNPQVDEKKQKKMDRRMRR 172
            .| :|:.::||.:......:...||::||:|:..|
plant   131 SG-LIRGFMSQGSEGGVEDEKSRKKREKMERKASR 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8320NP_611072.2 TMEM208_SND2 9..166 CDD:428546 41/157 (26%)
AT2G23940NP_565558.1 TMEM208_SND2 1..163 CDD:428546 44/162 (27%)

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