DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8320 and Tmem208

DIOPT Version :10

Sequence 1:NP_611072.2 Gene:CG8320 / 36759 FlyBaseID:FBgn0034059 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001099649.1 Gene:Tmem208 / 291963 RGDID:1560953 Length:173 Species:Rattus norvegicus


Alignment Length:180 Identity:78/180 - (43%)
Similarity:116/180 - (64%) Gaps:14/180 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPQQKGKQGTKGAKQIVEENKTTLTFYRNMAIGCAAPALLLSFLVFEVTKTSVFMHI---LSLL 62
            |||  |||.||:|.|||.||||.||.||..:.:|..|...|:: |.|..:..|.:..:   .||.
  Rat     1 MAP--KGKVGTRGKKQIFEENKETLKFYLRIILGANAIYCLVT-LAFFYSSASFWAWMALAFSLA 62

  Fly    63 ILGSSYQFMAFMSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLL 127
            :.|:||..|:.|::|.:||.|:|:|.|.|||||.|:||::||:|:||:...:|:.:|.|.|...|
  Rat    63 VYGASYHSMSSMARASFSEDGSLVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCLSLYIWSFWL 127

  Fly   128 LAPIRAGWMLWGSVIQPWLSQRNAQDDN---PQVDEKKQKKMDRR-MRRM 173
            |||.||.::||.:|:.||.    |.|..   |:::||:|::.:|| |:|:
  Rat   128 LAPGRALYLLWVNVLGPWF----AADSGAPAPELNEKRQRRQERRQMKRL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8320NP_611072.2 TMEM208_SND2 9..166 CDD:428546 68/162 (42%)
Tmem208NP_001099649.1 TMEM208_SND2 8..156 CDD:428546 64/152 (42%)

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