DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8320 and tmem-208

DIOPT Version :10

Sequence 1:NP_611072.2 Gene:CG8320 / 36759 FlyBaseID:FBgn0034059 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_492323.1 Gene:tmem-208 / 172649 WormBaseID:WBGene00011033 Length:169 Species:Caenorhabditis elegans


Alignment Length:171 Identity:61/171 - (35%)
Similarity:94/171 - (54%) Gaps:13/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KQGTKGAKQIVEENKTTLTFYR-----NMAIGCAAPALLLSFLVFEVTKTSVFMHILSLLILGSS 67
            ||.|||.|:|.|||:.|:|.|.     :|||..:: .:.||    :.:.|......:|.|:...:
 Worm     3 KQATKGQKEIYEENQKTVTTYSVASTISMAIYYSS-CMFLS----QCSSTDYVFFAVSALVQIFA 62

  Fly    68 YQFMAFMSQAKYSESGALLDSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIR 132
            ..||..:::||..:.|.:||:|.|||......|..||.||||....:::|.|.|.:|:||..|..
 Worm    63 ILFMKSLAKAKLDDKGHVLDAGADLNDPEAFGEYCKDAIILTVIIQIISLYSTYGFLLLLAFPGA 127

  Fly   133 AGWMLWGSVIQPWLSQRNAQDDNPQVDEKKQKKMDRRMRRM 173
            |.:......:.|||:   |..|:.::|:|||||:|||..::
 Worm   128 ATYKFVAGFLLPWLT---AGSDSDEMDDKKQKKLDRRREKV 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8320NP_611072.2 TMEM208_SND2 9..166 CDD:428546 56/161 (35%)
tmem-208NP_492323.1 TMEM208_SND2 4..163 CDD:428546 60/166 (36%)

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