DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8314 and GABPI

DIOPT Version :10

Sequence 1:NP_611070.1 Gene:CG8314 / 36757 FlyBaseID:FBgn0034057 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:279 Identity:68/279 - (24%)
Similarity:108/279 - (38%) Gaps:75/279 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MTWL------LILFAEFVVMRLILLP-SNYTV----------------FSTINMIIFQ------- 78
            ::||      :|:..||.|..|.|.| .||.:                .|.:|::..|       
  Fly   151 LSWLVFSVFYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKD 215

  Fly    79 ALAFLAFAS------------HIRTMLS-DPGAVPRGNATKEMIEQMGYREGQMFYKCPKCCSIK 130
            .|..:|.||            .:.::|| |...|    ...:..|:.|...||... |..|..:.
  Fly   216 ELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEV----GDMDTAERSGLMHGQPNI-CEICRKVT 275

  Fly   131 PERAHHCSVCQRCIRKMDHHCPWVNNCVGENNQKYFVLFTFYIASISVHTLFLV----LTQFAEC 191
            |.||:||.||..|:::.|||..|:|.|:||.|      :.:||..:::..:.|:    ||..:.|
  Fly   276 PRRAYHCPVCGTCVKRRDHHSYWLNCCIGERN------YVWYIVGLALSEIALLLGANLTLTSIC 334

  Fly   192 VKNDWRTCSPYSPPATIFLLLFLTFEGLMFGIFTII----MLATQLTAILNDQTGIEQLKKEEAR 252
              :.:....|...|..:.......|||...||..::    :|.:...|.:        |.::...
  Fly   335 --HPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFI--------LARQAYL 389

  Fly   253 WAKKSRL---KSIQSVFGR 268
            |.|.|.|   |...:..||
  Fly   390 WWKGSTLHEYKRTSNAAGR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8314NP_611070.1 DHHC 122..249 CDD:396215 35/134 (26%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 41/153 (27%)

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