DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strn-Mlck and CD22

DIOPT Version :9

Sequence 1:NP_001261019.1 Gene:Strn-Mlck / 36753 FlyBaseID:FBgn0265045 Length:8255 Species:Drosophila melanogaster
Sequence 2:NP_001762.2 Gene:CD22 / 933 HGNCID:1643 Length:847 Species:Homo sapiens


Alignment Length:790 Identity:153/790 - (19%)
Similarity:252/790 - (31%) Gaps:309/790 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  6340 TLQCNMR----GAPRPQVTWFKDGIQLSSSSERVKIRQIGSTCALTIATV---SEL-------DS 6390
            ||.|.:.    |.| .|:.|..:|:.:..::       :.|| :|||.:|   |||       ..
Human   158 TLTCLLNFSCYGYP-IQLQWLLEGVPMRQAA-------VTST-SLTIKSVFTRSELKFSPQWSHH 213

  Fly  6391 GR-YTCEATNSKGR----------VSTFARLQVVSDSRIYEADSRLKEIAHGRNVADVGDSLPIF 6444
            |: .||:..::.|:          |....:|::    ::..:|:.::|          |||    
Human   214 GKIVTCQLQDADGKF
LSNDTVQLNVKHTPKLEI----KVTPSDAIVRE----------GDS---- 260

  Fly  6445 TMRLRDRRVQVTYPVRLTCQIVGYPVPE---ILWYKDDELIHTDRKHLISAEGQFFTLEIAATTL 6506
                          |.:||: |....||   :.|.||...:.....         |||.:...|.
Human   261 --------------VTMTCE-VSSSNPEYTTVSWLKDGTSLKKQNT---------FTLNLREVTK 301

  Fly  6507 DDSGTYTCLARNELGSVSCHCTLVVDKGIRAYISPDFYVPLDPFYI------FREGSEIRLSTKV 6565
            |.||.|.|...|::|.         .:....::... |.| :|..:      ..|||::......
Human   302 DQSGKYCCQVSNDVGP---------GRSEEVFLQV
Q-YAP-EPSTVQILHSPAVEGSQVEFLCMS 355

  Fly  6566 EAYP-SVGVTWHRNGMRLRPSRRLTATLDSNGYVE--LIIAEATVRDAGIYVCVASNVVGKVETI 6627
            .|.| ....||:.||..::            |..|  :.|.:.....||.|.|||.|::|..:. 
Human   356 LANPLPTNYTWYHNGKEMQ------------GRTEEKVHIPKILPWHAGTYSCVAENILGTGQR- 407

  Fly  6628 CRVAVEEAENKAVAPQRSLEIPSIKTDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPE 6692
                         .|...|        |:.|..:.:..|........|||.|.:.|         
Human   408 -------------GPGAEL--------DV
QYPPKKVTTVIQNPMPIREGDTVTLSC--------- 442

  Fly  6693 VVWLRDFLNPEYYKDAPHFRRIGDGPEYRLEIPS---AKLDFTG----TYSVIASN--CHGEAKA 6748
                      .|....|...|....|....|.||   .|:...|    |.:..|.|  |...:..
Human   443 ----------NYNSSNPSVTRYEWKPHGAWEEPSLGVLKIQNVGWDNTTIACAACNSWCSWASPV 497

  Fly  6749 VISLQIFAKDI-LNKSR-MDKVHTRHGNIETLPRFVRNLRNLRCCDGDAISLECHVEAD--PEPF 6809
            .:::|...:|: :.|.: :.::|:                      |:::||:|...:.  .|..
Human   498 ALNV
QYAPRDVRVRKIKPLSEIHS----------------------GNSVSLQCDFSSSHPKEVQ 540

  Fly  6810 IIWEKDGHVMPSDRDYVMSFDGTKATLSIPRVYPEDEGEYTCVAKNSVGRSLSSACIIVDVPEEK 6874
            ..|||:|.::           |.::.|:...:.|||.|.|:|...||:|::.|.|..:..:    
Human   541 FFWEKNGRLL-----------GKESQLNFDSISPEDAGSYSCWVNNSIGQTASKAWTLEVL---- 590

  Fly  6875 ENMLSRQLARPSGLLSAHSTPRSTPRSTPARSFSPLRLSYRTSSIDLSGVAERRRSDARNAITAP 6939
                                            ::|.||....|                      
Human   591 --------------------------------YAPRRLRVSMS---------------------- 601

  Fly  6940 KFLAIPYNRVVEEGDSVRFQCAISGHPT----PWATWDKDGLIVTPTPRIAVKEIDDLRIIEIDE 7000
                 |.::|: ||.|....|....:|.    .|..|:...|     |..:.|       :.::.
Human   602 -----PGDQVM-EGKSATLTCESDANPPVSHYTWFDWNNQSL-----PYHSQK-------LRLEP 648

  Fly  7001 VTFDDAGLYRVTLENDFGRIEATARLDVIRSSRYSKSP-SVRSVRASSSRRNAHLYRRIMGPSTA 7064
            |....:|.|.....|..|:               .:|| |..:|..|              |.| 
Human   649 VKVQHSGAYWCQGTNSVGK---------------GRSPLSTLTVYYS--------------PET- 683

  Fly  7065 IGGRMALASG 7074
            ||.|:|:..|
Human   684 IGRRVAVGLG 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Strn-MlckNP_001261019.1 IG_like 51..127 CDD:214653
Ig <69..>112 CDD:299845
I-set 137..226 CDD:254352
I-set 235..314 CDD:254352
Ig_2 244..314 CDD:290606
I-set 438..513 CDD:254352
Ig 454..510 CDD:143165
I-set 537..626 CDD:254352
Ig 555..618 CDD:299845
I-set 636..713 CDD:254352
Ig 652..712 CDD:143165
SMC_N <2190..2854 CDD:280601
I-set 5300..5388 CDD:254352
IGc2 5313..5378 CDD:197706
IG 5412..5482 CDD:214652
IGc2 5413..5481 CDD:197706
I-set 5542..5627 CDD:254352
Ig 5556..5621 CDD:143165
Ig 5654..5721 CDD:143165
I-set 5784..5874 CDD:254352
IGc2 5797..5864 CDD:197706
I-set 5887..5970 CDD:254352
Ig 5902..5966 CDD:143165
I-set 5997..6086 CDD:254352
Ig 6026..6083 CDD:143165
I-set 6097..6187 CDD:254352
Ig 6114..6187 CDD:299845
FN3 6216..6310 CDD:238020
I-set 6321..6412 CDD:254352 23/96 (24%)
Ig 6328..6412 CDD:299845 23/96 (24%)
I-set 6442..6531 CDD:254352 20/91 (22%)
Ig 6459..6528 CDD:143165 20/71 (28%)
I-set 6541..6632 CDD:254352 23/99 (23%)
IGc2 6555..6622 CDD:197706 19/69 (28%)
I-set 6662..6754 CDD:254352 19/100 (19%)
Ig 6679..6751 CDD:143165 15/80 (19%)
I-set 6779..6868 CDD:254352 22/90 (24%)
IGc2 6793..6858 CDD:197706 19/66 (29%)
Ig 6938..7022 CDD:299845 17/87 (20%)
I-set 6939..7028 CDD:254352 17/92 (18%)
IG 7075..7140 CDD:214652 153/790 (19%)
Ig 7075..7140 CDD:143165 153/790 (19%)
IG 7167..7239 CDD:214652
Ig 7173..7239 CDD:143165
Ig 7392..7475 CDD:299845
IG 7406..7475 CDD:214652
FN3 7489..7588 CDD:238020
S_TKc 7620..7876 CDD:214567
STKc_MLCK 7626..7876 CDD:271005
CD22NP_001762.2 Ig 24..122 CDD:299845
C2-set_2 143..228 CDD:285423 21/78 (27%)
I-set 242..327 CDD:254352 26/135 (19%)
IGc2 257..316 CDD:197706 23/96 (24%)
Ig_3 335..400 CDD:290638 18/76 (24%)
IG_like 343..415 CDD:214653 22/105 (21%)
IG_like 433..501 CDD:214653 18/86 (21%)
I-set 510..589 CDD:254352 24/111 (22%)
IGc2 521..578 CDD:197706 19/89 (21%)
IG_like 606..677 CDD:214653 19/98 (19%)
IGc2 608..666 CDD:197706 14/69 (20%)
ITIM motif 1 760..765
ITIM motif 2 794..799
ITIM motif 3 820..825
ITIM motif 4 840..845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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