DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Strn-Mlck and kirrel3b

DIOPT Version :9

Sequence 1:NP_001261019.1 Gene:Strn-Mlck / 36753 FlyBaseID:FBgn0265045 Length:8255 Species:Drosophila melanogaster
Sequence 2:XP_021323594.1 Gene:kirrel3b / 572369 ZFINID:ZDB-GENE-100713-3 Length:795 Species:Danio rerio


Alignment Length:904 Identity:183/904 - (20%)
Similarity:285/904 - (31%) Gaps:301/904 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  6430 HGRNVADVGDSLPIFTMRLRDRRVQVTYPVRLTCQIVGYPVPEILWYKDD-------ELIHTDRK 6487
            ||.|.        :|:.:.:|..|....||.|.|.|.||. ..:||.:|.       :|....|.
Zfish    25 HGVNA--------VFSQQPQDLVVVAGQPVTLPCSIPGYH-GVVLWLRDGLALGVGRDLSGYPRY 80

  Fly  6488 HLISAEGQ-FFTLEIAATTLDDSGTYTCLA-RNELGSVSCHCTLVVDKGIRAYISPDFYVPLDPF 6550
            .::...|. ...|.|....|.|...:.|.| :..:.|.....|::|.       ..|..:...|.
Zfish    81 AVVGDHGSGEHHLRIQKVELMDDAVFECQAIQAAMRSRPARLTVLVP-------PDDPMITGGPV 138

  Fly  6551 YIFREGSEIRLSTKVE-AYPSVGVTWHRNG----------MRLRPSRRLTATLDSNGYVELIIAE 6604
            ...|.|..:.|:...: |.|:..:.|.|||          ..||..||                |
Zfish   139 VSLRAGDPLNLTCHADNAKPAASIIWIRNGEVLNGAMYSKTLLRDGRR----------------E 187

  Fly  6605 ATVRDAGIYVCVASNVVGKVETICRVAVEEAENKAVAPQRSLEIPSIKTDDLP---YSKEPLFVV 6666
            :||  :.:|:. |||:....:.|||     |.||||...:...: :|....||   .|.||..|:
Zfish   188 STV--STLYIS-ASNIESGQKIICR-----ASNKAVPNGKETSV-TIDIQHLPLVNLSVEPQPVL 243

  Fly  6667 KPRSSEAYEGDNVIIFCEVVGDPK-PEVVWLRDFLNPEYYKDAPHFRRIGDGPEYRLEIPSAKLD 6730
                    ||:.|...|....:|. .:..|.:   .....|:..     ||              
Zfish   244 --------EGNLVKFHCSAKANPPVTQYKWAK---GGSVIKEVS-----GD-------------- 278

  Fly  6731 FTGTYSVIASNCHGEAKAVISLQIFAKDILNKSRMDKVHTRHGNIETL--PRFVRNLRNLRCCDG 6793
               ||.||..  |......:|.::  .:.|..:.:.:      |::..  ||.....::|:...|
Zfish   279 ---TYEVIVD--HSFFTEPVSCEV--TNPLGSTNISR------NVDVYFGPRMAAEPQSLQVDLG 330

  Fly  6794 DAISLECHVEADPEPFIIWEKDGHVMPSDRDYVMSFDGTKATLSIPRVYPEDEGEYTCVA-KNSV 6857
            ......|....:|...|:|.|.|..:....:.:         |::..|..||.|:|.|.| ...|
Zfish   331 SDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENI---------LTLKSVRQEDAGKYVCRAVVPRV 386

  Fly  6858 GRSLSSACIIVDVPEEKENMLSRQLARPSGLLSAHSTPRSTP-------RSTPARSFSPLRLSYR 6915
            |.:.....:.|:.|   ..:.|.|         .|..|....       ||||    .|.|:::.
Zfish   387 GAAEKEVSLTVNGP---PTISSTQ---------THQAPHGEKGQIKCFIRSTP----PPDRIAWS 435

  Fly  6916 TSSIDLSGVAERRRSDARNAITAPKFLAIPYNRVVEEGDSVRFQCAISGHPTPWATWDKDGLIVT 6980
            ..                             ..|:|.|.|.|:        |......:||::.|
Zfish   436 WK-----------------------------ETVLESGTSGRY--------TVETVSTEDGVLST 463

  Fly  6981 PTPRIAVKEIDDLRIIEIDEVTFDDAGLYRVTLENDFGRIEATARLDVIRSSRYSKSPSV----- 7040
            .|..         .|:..|..|     :|..|..|.||......||.....|:.|...:|     
Zfish   464 LTMS---------NIVPADFQT-----IYNCTAWNSFGSDTEIIRLKEQGGSQDSLPVAVIIGVA 514

  Fly  7041 --------------------RSVRASSSR---RNAHLYRRIMGPSTAIGGRMALASGYRGSSVPS 7082
                                ||.|..|:.   .:|||....: |::....:..|||..:..::..
Zfish   515 VGAFVAFIVLMGTIGAFCCTRSQRKKSAHLCTEDAHLVMPTL-PTSICAQQRELASKIKTENLKG 578

  Fly  7083 VRFYHNDVELEASERVHILLQDS-----MALLIVD-------------NVTREDEGQYTCIISGD 7129
            |....||:.:|...:.|...::|     |..|:::             .|.:|:|.:|..|    
Zfish   579 VVSAKNDIRVEIVHKDHNAARESEEHSGMKQLMIERGEFQQESVLKQLEVLQEEEKEYQHI---- 639

  Fly  7130 HDPLI-------------TSTTVTFHDSNTEIRRRRAVIT---ERLP------------------ 7160
            .||..             |.||:. .:..||:||..|..|   :|:|                  
Zfish   640 KDPTNGYYSVNTFKEHHGTPTTMA-GNQTTELRRDPATATTGKQRVPTGMSFTNIYSTLGAGPNR 703

  Fly  7161 ------EITKSLEGEVIDLC---------------CSIECDEPYSYVWLRNGEILPDSD 7198
                  .....:....|:||               ...:||...|....::|.:..|.|
Zfish   704 LYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSVSSYSKQDGYVQFDKD 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Strn-MlckNP_001261019.1 IG_like 51..127 CDD:214653
Ig <69..>112 CDD:299845
I-set 137..226 CDD:254352
I-set 235..314 CDD:254352
Ig_2 244..314 CDD:290606
I-set 438..513 CDD:254352
Ig 454..510 CDD:143165
I-set 537..626 CDD:254352
Ig 555..618 CDD:299845
I-set 636..713 CDD:254352
Ig 652..712 CDD:143165
SMC_N <2190..2854 CDD:280601
I-set 5300..5388 CDD:254352
IGc2 5313..5378 CDD:197706
IG 5412..5482 CDD:214652
IGc2 5413..5481 CDD:197706
I-set 5542..5627 CDD:254352
Ig 5556..5621 CDD:143165
Ig 5654..5721 CDD:143165
I-set 5784..5874 CDD:254352
IGc2 5797..5864 CDD:197706
I-set 5887..5970 CDD:254352
Ig 5902..5966 CDD:143165
I-set 5997..6086 CDD:254352
Ig 6026..6083 CDD:143165
I-set 6097..6187 CDD:254352
Ig 6114..6187 CDD:299845
FN3 6216..6310 CDD:238020
I-set 6321..6412 CDD:254352
Ig 6328..6412 CDD:299845
I-set 6442..6531 CDD:254352 24/97 (25%)
Ig 6459..6528 CDD:143165 19/77 (25%)
I-set 6541..6632 CDD:254352 25/101 (25%)
IGc2 6555..6622 CDD:197706 19/77 (25%)
I-set 6662..6754 CDD:254352 17/92 (18%)
Ig 6679..6751 CDD:143165 12/72 (17%)
I-set 6779..6868 CDD:254352 20/89 (22%)
IGc2 6793..6858 CDD:197706 15/65 (23%)
Ig 6938..7022 CDD:299845 18/83 (22%)
I-set 6939..7028 CDD:254352 20/88 (23%)
IG 7075..7140 CDD:214652 18/95 (19%)
Ig 7075..7140 CDD:143165 18/95 (19%)
IG 7167..7239 CDD:214652 9/47 (19%)
Ig 7173..7239 CDD:143165 8/41 (20%)
Ig 7392..7475 CDD:299845
IG 7406..7475 CDD:214652
FN3 7489..7588 CDD:238020
S_TKc 7620..7876 CDD:214567
STKc_MLCK 7626..7876 CDD:271005
kirrel3bXP_021323594.1 IG_like 35..124 CDD:214653 22/89 (25%)
Ig2_KIRREL3-like 146..227 CDD:143236 27/105 (26%)
Ig_2 235..312 CDD:316418 21/119 (18%)
I-set 316..397 CDD:333254 20/89 (22%)
Ig5_KIRREL3 399..496 CDD:143306 30/163 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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