Sequence 1: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005160777.1 | Gene: | hmcn1 / 559150 | ZFINID: | ZDB-GENE-041014-322 | Length: | 5623 | Species: | Danio rerio |
Alignment Length: | 3914 | Identity: | 779/3914 - (19%) |
---|---|---|---|
Similarity: | 1309/3914 - (33%) | Gaps: | 1303/3914 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 4998 TDEKAEESRKEEVKDSEAKPKKAKVLEKKSIEEEKLEDKKEKQTESAI---DEKSQKAEVSETVS 5059
Fly 5060 EKITDEKAQESQKKEVKDSEAKPKKAKILEKKSIEIEKLDEKKEKQTETKVATDTK--------- 5115
Fly 5116 ----SQTVEVSEIVLEKISEEKAEESQKVEL--------------KDSEAKSKKAKVLEKKSTLK 5162
Fly 5163 ---EKLDENDKKQKEDG-----ATNKSQKAEAA-----DVVP-EKISE--------EKVAEIKTP 5205
Fly 5206 EPMDSKAKSKP------DGLPADEKSHGAKVSE--------SV-PVKN------------EAEKT 5243
Fly 5244 DQLSAK-KPTVLDEDL------VVPKRKPYLAEQTADSISLQTYKSMDSEYKDRKESRSAKRKPT 5301
Fly 5302 VDIQLTNR-------------------------------------------NTASGSDLK----- 5318
Fly 5319 ---LTCGLSGHEM-NVQWFKDNCPIENGAKYRRTLNDGLSCLEIKSAELGDSGIYRCIASNQNGE 5379
Fly 5380 VETSCLVTIYEAPSSKFGTPPIFTRNI-RDAYHSQGNQLTLECKVSGSPKPHIYWQRDNTLLPIE 5443
Fly 5444 GTKYQYEEQSDGIKLLTINNFGSNDSGLYTCYAESENGQMKISKFVQASDYVRERIA-------- 5500
Fly 5501 ---------------------------DKKPID-----KVIQEIKRDESSSAAAND----TAAAK 5529
Fly 5530 AKAREAKLRLNLETSLKTMTIGS----------GNKAQLICYVTG-IIEDVHWLRN--------D 5575
Fly 5576 ERVTKDARHKIYNINGAISLEIYDARVEDSGHYRCVVKNSRQTVESAGQLSVLDQSTGKLPESF- 5639
Fly 5640 SSGIIESYDDQRNEIVLSCQVIG--RPSVSWMRDDHSI-CNNRYRTIEEPGGVRKLVIRNPISSD 5701
Fly 5702 CGIFACYAEHEDRIDSTSITIKAADLKRLINVSQEEIPSIGDHESTPWSRSQSHLSSGSQVNGNG 5766
Fly 5767 ELHRAGDRVLRNVGKGKPLFHTLLHDRTVSEGANLRLVCSVSGDENTHIEWLKNHKPLPRSDNRY 5831
Fly 5832 QTVYLNGEASLEIFAAVADDSGNYTCCATNDFGESLTHAQLRVYKNFKEAPLPSTFT-------- 5888
Fly 5889 ---QPIRDTYSLNENELVLDCRVRGQPRPEIQWIKGTEPIEASEKFKPSDQA-DGYAKLVIVNPT 5949
Fly 5950 EKDSGIYWCVARNEGAENKISHQVDFKGRQHYSLEKTHGFFHRDPNKPHFLLPLGNQTVCNGGTV 6014
Fly 6015 AISAEFMETSTPIEVKWLRDRRVVDGPNVKALADRGVYTLTIMNAGPEVEGTYTCRASNAFGRIE 6079
Fly 6080 SNVNVDVAVGAEKDERPPLFLSRPD-TEMKIAVGDPFSLSFRIAGDPKPKLTFMKGTKDITQSDR 6143
Fly 6144 VSKEVSDDYTRFSVQQAQISDSGTYFVVARNNFGTD------RIFVTVTVNPRARSATPTQPRWG 6202
Fly 6203 LPLDSYSDTSYFRDPPGCISTEPLVVDSGPTHISLSW---GKPVSA-------NSAPVMAYKVEA 6257
Fly 6258 WVVGHEGGAYWRELGLTPINSFDAFNLKPNVEYHFRVTPKNRYGWGPTVQTSSPLQVGGVECLPE 6322
Fly 6323 FVKILPGQAKALLGSSFTLQCNMRGAPRPQVTWFKDGIQLSSSSERVKIRQIGSTCALTIATVSE 6387
Fly 6388 LDSGRYTCEATNSKGRV-STFARLQVVSDSRIYEADSRLKEIAHGRNVADVGDSLPIFTMRLRDR 6451
Fly 6452 RVQVTYPVRLTCQIVGYPVPEILWYKDDELIHTDRKHLISAEGQFFTLEIAATTLDDSGTYTCLA 6516
Fly 6517 RNELGSVSCHCTLVVDKGIRAYISP------------DFYVPLDPFYIFREGSEIRLSTKVEAYP 6569
Fly 6570 SVGVTWHRNGMRLRPSRRLTATLDSNGYVELIIAEATVRDAGIYVCVASNVVGKVETICRVAVEE 6634
Fly 6635 AENKAVAPQRSLEIPSIKTDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPEVVWLRDF 6699
Fly 6700 LNPEYYKDAPHFRRIGDGPEYRL-EIPSAKLDFTGTYSVIASNCHGEAKAVISLQIFAKDILNKS 6763
Fly 6764 RMDKVHTRHGNIETLPRFVRNLRNLRCCDGDA----------------ISLECHVEADPEPFIIW 6812
Fly 6813 EKDGHVMPSDRDYVMSFDGTKATLSIPRVYPEDEGEYTCVAKNSVGRSLSSACIIV--------- 6868
Fly 6869 --DVPEEKENMLSRQLARPSGLLSAHSTPRSTPRSTPARSFSPL------RL--SYRTSSI---- 6919
Fly 6920 ------------DLSGVAER--------------------------------------------- 6927
Fly 6928 --RR--SDARNAITAP----------------KFLAIPYNRV----------------------- 6949
Fly 6950 ------VEEGDSVRFQCAISGHPTPWATWDKDGLIVTPTPRIAVKEIDDLRIIEIDEVTFDDAGL 7008
Fly 7009 YRVTLENDFGRIEATARLDV--------------------------------------------- 7028
Fly 7029 ------------------IRSSRYSKSPSVRSVRAS---SSRRNAHLYRRIMGPSTAIGGRM--- 7069
Fly 7070 ---------ALASGYRGSSVPSVRFYHNDVELEASERVHILLQDSMALLIVDNVTREDEGQYTCI 7125
Fly 7126 I---SGDHD----------PLITSTTVTFHDSNTEIRRRRAVITERLPEITKSLEGEVIDLCCSI 7177
Fly 7178 EC----DEPYSYVWLRNGEILPDSDEFNYIDHGNGRLCLRINDAFDIDSGIYSC----------- 7227
Fly 7228 ----QVFTSDIND---STSDSTFDSHSICSLINSGC-SDCSSSGELCVLERDLRGQDEECVQLL- 7283
Fly 7284 -KTPLPVV-----------CASGDEALFYARVFPCDAEADWYLNG---------------QLLAQ 7321
Fly 7322 AD----DSLNMTLESYP----ENGIRLLR------------------------------------ 7342
Fly 7343 ------------MRDVTASRSGEICLQVKHPQAEFRRIPTTRTY----TSLLVLPAIRGNSSSSS 7391
Fly 7392 LAARSCIL--TRPEDCTAL-IGG----HVRLSVRYEP-------------------------FPG 7424
Fly 7425 TKVIWYKACHPIVESSNVTIRTTSQQSTLYITDISADDSGKYTVEVMNDYGVEAAAASVAVEGPP 7489
Fly 7490 EPPSGQPSVSLGPDRVAVAWCGPPYDGGCMITGFIIEMQTIGDENCDED-------SWQQVTRVV 7547
Fly 7548 D--------------SLAYTVKNLQPERQYRFRVRAENIHGRSAPGQASELVQITNTPQRSTSSD 7598
Fly 7599 ASD----RFGQATVSVQSGGD-------FKSRFEIIEELGKGRFGIVYKVQERGQPEQLLAAKV- 7651
Fly 7652 ----IKCIKS-------QDRQKVLEEISIMRALQHPKLLQL---------AASFESPREIVM--- 7693
Fly 7694 --VMEYITGG----------ELFERVVADDFTLTEMDCILFLRQVCDGVAYMHGQSVVHLDLKP- 7745
Fly 7746 --ENIMCHTRTSHQIKIIDFGLAQRLDTKAPVRVLFGTPEFIPPEIISYEPIG------FQSDMW 7802
Fly 7803 SVGVI--------------CYVL-LSGLSPF-------------MGDTDVETFSNITRADYDYDD 7839
Fly 7840 EAFDCVSQEAKDFISQLLVHRKEDRLTAQQCLASKWL---------SQRPDDSLSNNKICTDKLK 7895
Fly 7896 KFIIRRKWQKTGNAIRALG-----------RMANLSVSRRNSAIAM-GVLSSPRPSI-------- 7940
Fly 7941 --------SGLGMLTTSAIGSGTSSQMTSLHE--------------------EEDDFSGEMPPVE 7977
Fly 7978 KRTVLKLRDKS---------------QCSER----------------SDSGYSEC--SNCSGAQE 8009
Fly 8010 -TLLLSLAKSKLEAIAKASTL----PTVVHDTE---QPVS-LELPTKGEAIMRSDF-----TNTI 8060
Fly 8061 KMRKKSLEDSAARE 8074 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
Ig | <69..>112 | CDD:299845 | |||
I-set | 137..226 | CDD:254352 | |||
I-set | 235..314 | CDD:254352 | |||
Ig_2 | 244..314 | CDD:290606 | |||
I-set | 438..513 | CDD:254352 | |||
Ig | 454..510 | CDD:143165 | |||
I-set | 537..626 | CDD:254352 | |||
Ig | 555..618 | CDD:299845 | |||
I-set | 636..713 | CDD:254352 | |||
Ig | 652..712 | CDD:143165 | |||
SMC_N | <2190..2854 | CDD:280601 | |||
I-set | 5300..5388 | CDD:254352 | 31/139 (22%) | ||
IGc2 | 5313..5378 | CDD:197706 | 26/73 (36%) | ||
IG | 5412..5482 | CDD:214652 | 21/69 (30%) | ||
IGc2 | 5413..5481 | CDD:197706 | 21/67 (31%) | ||
I-set | 5542..5627 | CDD:254352 | 21/103 (20%) | ||
Ig | 5556..5621 | CDD:143165 | 18/73 (25%) | ||
Ig | 5654..5721 | CDD:143165 | 18/69 (26%) | ||
I-set | 5784..5874 | CDD:254352 | 22/89 (25%) | ||
IGc2 | 5797..5864 | CDD:197706 | 19/66 (29%) | ||
I-set | 5887..5970 | CDD:254352 | 22/94 (23%) | ||
Ig | 5902..5966 | CDD:143165 | 20/64 (31%) | ||
I-set | 5997..6086 | CDD:254352 | 23/88 (26%) | ||
Ig | 6026..6083 | CDD:143165 | 16/56 (29%) | ||
I-set | 6097..6187 | CDD:254352 | 17/96 (18%) | ||
Ig | 6114..6187 | CDD:299845 | 15/78 (19%) | ||
FN3 | 6216..6310 | CDD:238020 | 17/103 (17%) | ||
I-set | 6321..6412 | CDD:254352 | 28/91 (31%) | ||
Ig | 6328..6412 | CDD:299845 | 26/84 (31%) | ||
I-set | 6442..6531 | CDD:254352 | 29/88 (33%) | ||
Ig | 6459..6528 | CDD:143165 | 27/68 (40%) | ||
I-set | 6541..6632 | CDD:254352 | 27/102 (26%) | ||
IGc2 | 6555..6622 | CDD:197706 | 21/66 (32%) | ||
I-set | 6662..6754 | CDD:254352 | 20/92 (22%) | ||
Ig | 6679..6751 | CDD:143165 | 19/72 (26%) | ||
I-set | 6779..6868 | CDD:254352 | 34/104 (33%) | ||
IGc2 | 6793..6858 | CDD:197706 | 30/80 (38%) | ||
Ig | 6938..7022 | CDD:299845 | 22/128 (17%) | ||
I-set | 6939..7028 | CDD:254352 | 23/133 (17%) | ||
IG | 7075..7140 | CDD:214652 | 16/77 (21%) | ||
Ig | 7075..7140 | CDD:143165 | 16/77 (21%) | ||
IG | 7167..7239 | CDD:214652 | 26/93 (28%) | ||
Ig | 7173..7239 | CDD:143165 | 24/87 (28%) | ||
Ig | 7392..7475 | CDD:299845 | 21/114 (18%) | ||
IG | 7406..7475 | CDD:214652 | 18/98 (18%) | ||
FN3 | 7489..7588 | CDD:238020 | 20/119 (17%) | ||
S_TKc | 7620..7876 | CDD:214567 | 52/328 (16%) | ||
STKc_MLCK | 7626..7876 | CDD:271005 | 52/322 (16%) | ||
hmcn1 | XP_005160777.1 | VWA_2 | 36..206 | CDD:290253 | |
IG_like | 443..510 | CDD:214653 | |||
I-set | 514..600 | CDD:254352 | |||
ig | 522..596 | CDD:278476 | |||
I-set | 604..688 | CDD:254352 | |||
Ig | 618..689 | CDD:299845 | |||
I-set | 694..781 | CDD:254352 | |||
IGc2 | 708..771 | CDD:197706 | |||
I-set | 785..876 | CDD:254352 | |||
Ig | 789..876 | CDD:299845 | |||
IG | 888..969 | CDD:214652 | |||
IGc2 | 895..959 | CDD:197706 | |||
I-set | 973..1060 | CDD:254352 | 4/14 (29%) | ||
Ig | 990..1059 | CDD:299845 | 4/13 (31%) | ||
IG | 1084..1162 | CDD:214652 | 21/95 (22%) | ||
Ig | 1092..1159 | CDD:143165 | 19/84 (23%) | ||
I-set | 1166..1251 | CDD:254352 | 17/86 (20%) | ||
IGc2 | 1179..1241 | CDD:197706 | 10/61 (16%) | ||
I-set | 1251..1348 | CDD:254352 | 21/96 (22%) | ||
Ig | 1254..1348 | CDD:299845 | 20/93 (22%) | ||
I-set | 1360..1441 | CDD:254352 | 10/91 (11%) | ||
IGc2 | 1367..1431 | CDD:197706 | 9/74 (12%) | ||
I-set | 1450..1535 | CDD:254352 | 28/85 (33%) | ||
IGc2 | 1461..1525 | CDD:197706 | 24/64 (38%) | ||
IG_like | 1547..1628 | CDD:214653 | 24/86 (28%) | ||
Ig | 1558..1625 | CDD:143165 | 21/72 (29%) | ||
I-set | 1641..1722 | CDD:254352 | 9/80 (11%) | ||
Ig | 1641..1718 | CDD:299845 | 9/76 (12%) | ||
Ig | 1725..1817 | CDD:299845 | 23/107 (21%) | ||
IG | 1738..1815 | CDD:214652 | 20/86 (23%) | ||
Ig | 1818..1908 | CDD:299845 | 25/102 (25%) | ||
IG | 1826..1908 | CDD:214652 | 22/94 (23%) | ||
IG | 1922..2001 | CDD:214652 | 22/81 (27%) | ||
Ig | 1927..2001 | CDD:299845 | 21/76 (28%) | ||
IG | 2014..2093 | CDD:214652 | 26/110 (24%) | ||
IGc2 | 2019..2083 | CDD:197706 | 22/89 (25%) | ||
Ig | 2096..2186 | CDD:299845 | 24/91 (26%) | ||
IG_like | 2107..2184 | CDD:214653 | 21/78 (27%) | ||
Ig | 2187..2280 | CDD:299845 | 17/94 (18%) | ||
I-set | 2197..2277 | CDD:254352 | 15/81 (19%) | ||
Ig | 2292..2371 | CDD:299845 | 18/105 (17%) | ||
IG | 2292..2369 | CDD:214652 | 18/103 (17%) | ||
I-set | 2373..2463 | CDD:254352 | 29/99 (29%) | ||
IGc2 | 2391..2453 | CDD:197706 | 24/64 (38%) | ||
IG | 2476..2556 | CDD:214652 | 31/95 (33%) | ||
IGc2 | 2484..2546 | CDD:197706 | 24/68 (35%) | ||
IG | 2572..2652 | CDD:214652 | 27/97 (28%) | ||
IGc2 | 2583..2642 | CDD:197706 | 20/61 (33%) | ||
I-set | 2670..2751 | CDD:254352 | 22/107 (21%) | ||
IGc2 | 2678..2741 | CDD:197706 | 17/68 (25%) | ||
IG | 2774..2850 | CDD:214652 | 29/77 (38%) | ||
IGc2 | 2777..2840 | CDD:197706 | 28/64 (44%) | ||
I-set | 2864..2945 | CDD:254352 | 17/85 (20%) | ||
Ig | 2864..2938 | CDD:299845 | 15/78 (19%) | ||
Ig | 2949..3039 | CDD:299845 | 7/89 (8%) | ||
IG_like | 2957..3037 | CDD:214653 | 7/79 (9%) | ||
I-set | 3051..3132 | CDD:254352 | 20/82 (24%) | ||
IGc2 | 3059..3122 | CDD:197706 | 17/64 (27%) | ||
I-set | 3154..3226 | CDD:254352 | 8/71 (11%) | ||
Ig | 3154..3223 | CDD:143165 | 6/68 (9%) | ||
Ig | 3229..3323 | CDD:299845 | 17/93 (18%) | ||
I-set | 3238..3321 | CDD:254352 | 14/82 (17%) | ||
IG | 3335..3415 | CDD:214652 | 23/105 (22%) | ||
Ig | 3343..3415 | CDD:299845 | 20/74 (27%) | ||
Ig | 3418..3508 | CDD:299845 | 18/92 (20%) | ||
IG | 3428..3508 | CDD:214652 | 15/82 (18%) | ||
IG | 3520..3601 | CDD:214652 | 13/81 (16%) | ||
Ig | <3533..3603 | CDD:299845 | 13/70 (19%) | ||
I-set | 3614..3694 | CDD:254352 | 19/83 (23%) | ||
IGc2 | 3620..3684 | CDD:197706 | 14/67 (21%) | ||
Ig | 3697..3787 | CDD:299845 | 15/91 (16%) | ||
IG_like | 3704..3785 | CDD:214653 | 13/82 (16%) | ||
Ig | 3788..3878 | CDD:299845 | 21/121 (17%) | ||
I-set | 3789..3878 | CDD:254352 | 20/113 (18%) | ||
IG_like | 3891..3969 | CDD:214653 | 11/84 (13%) | ||
Ig | 3899..3968 | CDD:299845 | 10/75 (13%) | ||
IG_like | 3979..4060 | CDD:214653 | 16/88 (18%) | ||
Ig | 3990..4052 | CDD:299845 | 12/67 (18%) | ||
I-set | 4064..4150 | CDD:254352 | 15/102 (15%) | ||
IGc2 | 4080..4140 | CDD:197706 | 9/70 (13%) | ||
Ig | 4161..4241 | CDD:299845 | 17/103 (17%) | ||
IG_like | 4161..4241 | CDD:214653 | 17/103 (17%) | ||
I-set | 4245..4324 | CDD:254352 | 11/78 (14%) | ||
IGc2 | 4260..4320 | CDD:197706 | 10/59 (17%) | ||
Ig | 4352..4420 | CDD:299845 | 11/67 (16%) | ||
I-set | 4425..4511 | CDD:254352 | 13/69 (19%) | ||
Ig | 4439..4512 | CDD:299845 | 12/55 (22%) | ||
TSP1 | 4518..4569 | CDD:214559 | |||
TSP1 | 4583..4626 | CDD:214559 | |||
TSP1 | 4631..4683 | CDD:214559 | |||
TSP1 | 4688..4740 | CDD:214559 | |||
TSP1 | 4745..4797 | CDD:214559 | |||
TSP1 | 4802..4854 | CDD:214559 | |||
nidG2 | 4855..5070 | CDD:238158 | |||
EGF_CA | 5091..5130 | CDD:214542 | |||
EGF_CA | 5131..5174 | CDD:284955 | |||
EGF_CA | 5176..5213 | CDD:214542 | |||
EGF_CA | 5214..5251 | CDD:214542 | |||
EGF_CA | 5256..5297 | CDD:284955 | |||
EGF_CA | 5299..5338 | CDD:214542 | |||
EGF_CA | 5420..5459 | CDD:214542 | |||
EGF_CA | 5460..5496 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I9840 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 387 | 1.000 | Inparanoid score | I1972 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.050 |