| Sequence 1: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_940908.3 | Gene: | LRIT3 / 345193 | HGNCID: | 24783 | Length: | 679 | Species: | Homo sapiens |
| Alignment Length: | 641 | Identity: | 112/641 - (17%) |
|---|---|---|---|
| Similarity: | 196/641 - (30%) | Gaps: | 251/641 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6430 HGRN--------------VADVGDSLPIFTMRLRDRRVQVTYPVRLTCQIVGYPVP-EILWYKDD 6479
Fly 6480 ELIHTDRKHLISAEGQFFTLEIAATTLDDSGTYTCLARNELGSVSCH---CTLVVDKGIR----- 6536
Fly 6537 AYIS----------PDFYVPLDPFYIFREGSEIRLSTKVEAYPSVGVTWHRNGMRLRPSRRLTAT 6591
Fly 6592 LDS----NGYVELIIAEATVRDAGIYVCVASNVVGKVETICRVAVEEAENKAVAPQRSLEIPSIK 6652
Fly 6653 TDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPEVVWLRDFLNPEYYKDAPHFRRIGDG 6717
Fly 6718 PEYRLEIPSAKLDFTGTYSVIASNCHGEAKAVISLQIFAKDILNKSRMDKVHTRHGNIETLPRFV 6782
Fly 6783 RNLRNLRCCDGDAISLECHVEADPEPFIIWEKDGHVMPSDRDYVMSFDGTKATLSIPRVYPEDEG 6847
Fly 6848 EYTCVAKNSVGRSLSSACIIVDV---------PEEKENM-------------LSRQLARPSGLL- 6889
Fly 6890 -------SAHSTPRSTPRSTPARSFSPLRLSYRTSSIDLSGVAERRRSDARNAITAPKFLAIPYN 6947
Fly 6948 RVVEEGDSVRFQCAISGHPTPWATWDK-------DGLIVTPTPRIAVKEIDDLRII 6996 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
| Ig | <69..>112 | CDD:299845 | |||
| I-set | 137..226 | CDD:254352 | |||
| I-set | 235..314 | CDD:254352 | |||
| Ig_2 | 244..314 | CDD:290606 | |||
| I-set | 438..513 | CDD:254352 | |||
| Ig | 454..510 | CDD:143165 | |||
| I-set | 537..626 | CDD:254352 | |||
| Ig | 555..618 | CDD:299845 | |||
| I-set | 636..713 | CDD:254352 | |||
| Ig | 652..712 | CDD:143165 | |||
| SMC_N | <2190..2854 | CDD:280601 | |||
| I-set | 5300..5388 | CDD:254352 | |||
| IGc2 | 5313..5378 | CDD:197706 | |||
| IG | 5412..5482 | CDD:214652 | |||
| IGc2 | 5413..5481 | CDD:197706 | |||
| I-set | 5542..5627 | CDD:254352 | |||
| Ig | 5556..5621 | CDD:143165 | |||
| Ig | 5654..5721 | CDD:143165 | |||
| I-set | 5784..5874 | CDD:254352 | |||
| IGc2 | 5797..5864 | CDD:197706 | |||
| I-set | 5887..5970 | CDD:254352 | |||
| Ig | 5902..5966 | CDD:143165 | |||
| I-set | 5997..6086 | CDD:254352 | |||
| Ig | 6026..6083 | CDD:143165 | |||
| I-set | 6097..6187 | CDD:254352 | |||
| Ig | 6114..6187 | CDD:299845 | |||
| FN3 | 6216..6310 | CDD:238020 | |||
| I-set | 6321..6412 | CDD:254352 | |||
| Ig | 6328..6412 | CDD:299845 | |||
| I-set | 6442..6531 | CDD:254352 | 18/92 (20%) | ||
| Ig | 6459..6528 | CDD:143165 | 12/72 (17%) | ||
| I-set | 6541..6632 | CDD:254352 | 18/94 (19%) | ||
| IGc2 | 6555..6622 | CDD:197706 | 14/70 (20%) | ||
| I-set | 6662..6754 | CDD:254352 | 14/91 (15%) | ||
| Ig | 6679..6751 | CDD:143165 | 11/71 (15%) | ||
| I-set | 6779..6868 | CDD:254352 | 16/88 (18%) | ||
| IGc2 | 6793..6858 | CDD:197706 | 13/64 (20%) | ||
| Ig | 6938..7022 | CDD:299845 | 14/66 (21%) | ||
| I-set | 6939..7028 | CDD:254352 | 13/65 (20%) | ||
| IG | 7075..7140 | CDD:214652 | |||
| Ig | 7075..7140 | CDD:143165 | |||
| IG | 7167..7239 | CDD:214652 | |||
| Ig | 7173..7239 | CDD:143165 | |||
| Ig | 7392..7475 | CDD:299845 | |||
| IG | 7406..7475 | CDD:214652 | |||
| FN3 | 7489..7588 | CDD:238020 | |||
| S_TKc | 7620..7876 | CDD:214567 | |||
| STKc_MLCK | 7626..7876 | CDD:271005 | |||
| LRIT3 | NP_940908.3 | LRR 1 | 56..79 | 6/25 (24%) | |
| leucine-rich repeat | 59..82 | CDD:275378 | 6/25 (24%) | ||
| LRR_8 | 61..117 | CDD:290566 | 11/59 (19%) | ||
| LRR 2 | 80..103 | 4/22 (18%) | |||
| leucine-rich repeat | 83..106 | CDD:275378 | 3/23 (13%) | ||
| LRR 3 | 104..128 | 4/24 (17%) | |||
| LRR_8 | 105..165 | CDD:290566 | 11/60 (18%) | ||
| LRR_4 | 105..146 | CDD:289563 | 8/41 (20%) | ||
| leucine-rich repeat | 107..130 | CDD:275378 | 3/22 (14%) | ||
| LRR 4 | 129..151 | 4/21 (19%) | |||
| LRR_4 | 131..170 | CDD:289563 | 7/38 (18%) | ||
| leucine-rich repeat | 131..154 | CDD:275378 | 5/22 (23%) | ||
| LRR 5 | 152..175 | 5/37 (14%) | |||
| leucine-rich repeat | 155..168 | CDD:275378 | 2/12 (17%) | ||
| Ig | 267..345 | CDD:299845 | 30/194 (15%) | ||
| IG_like | 267..345 | CDD:214653 | 30/194 (15%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 351..375 | 2/23 (9%) | |||
| FN3 | 486..550 | CDD:214495 | 3/8 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||