Sequence 1: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 850 | Identity: | 178/850 - (20%) |
---|---|---|---|
Similarity: | 298/850 - (35%) | Gaps: | 227/850 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 6458 PVRLTCQIVGYPVPEILWYKDD---ELIHTDRKHLISAEGQFFTLEIAATTLDDSGTYTCLARNE 6519
Fly 6520 LG-SVSCHCTLVVDKGIRAYISPDFYVPLDPFYIFREGSEIRLSTKVEAYPSVGVTWHRNGMR-- 6581
Fly 6582 LRPSRRLTATLDSNGYVELIIAEATVRDAGIYVCVASNVVGKVETICRVAVEEAENKAVAPQRSL 6646
Fly 6647 EIPSIKTDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPEVVWLRDFLNPEYYKDAPHF 6711
Fly 6712 RRIGDGPEYRLEIPSAKLDFTGTYSVIASNCHGEAKAVISLQIFAKDILNKSRMDKVHTRHGNIE 6776
Fly 6777 TLPRFVRNLRNLRCCDGDAISLECHVEADPEPFIIWE-KDGHVM------PSDRDYVMSFDGTKA 6834
Fly 6835 TLSIPRVYPEDEG-EYTCVAKNSVGRSLSSACIIVDVPEEKENMLSRQLARPSGLLSAHSTPRST 6898
Fly 6899 PRSTPARSFSPLRLSYRTSSIDLSGVAERRRSDARNAITAPKFLAIPYNRVVEEGDSVRFQCAIS 6963
Fly 6964 GHPTPWATWDKDGLIVTPTPRIAVKEIDDLRIIEIDEVTFDDAGLYRVTLENDFG--------RI 7020
Fly 7021 E--ATARLDVIRSSRYSKSPSV----RSVRASSSRRNAHLYRRIMGPSTAIGGRMALASGYRGSS 7079
Fly 7080 VPSVRFYHNDVELEASERVHILLQDSMALLIVDNVTREDEGQYTCIISGDH-----------DPL 7133
Fly 7134 ITSTTVTFHDSNTEIRRRRAVITERLPEITKSLE-GEVIDLCCSIECDEPYSYVWLRNGEILPDS 7197
Fly 7198 DEFNYIDHGNGRLCLRINDAFDIDSGIY--SCQVFTSDINDSTSDSTFDSHSICSLIN--SGCSD 7258
Fly 7259 CSSSG 7263 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
Ig | <69..>112 | CDD:299845 | |||
I-set | 137..226 | CDD:254352 | |||
I-set | 235..314 | CDD:254352 | |||
Ig_2 | 244..314 | CDD:290606 | |||
I-set | 438..513 | CDD:254352 | |||
Ig | 454..510 | CDD:143165 | |||
I-set | 537..626 | CDD:254352 | |||
Ig | 555..618 | CDD:299845 | |||
I-set | 636..713 | CDD:254352 | |||
Ig | 652..712 | CDD:143165 | |||
SMC_N | <2190..2854 | CDD:280601 | |||
I-set | 5300..5388 | CDD:254352 | |||
IGc2 | 5313..5378 | CDD:197706 | |||
IG | 5412..5482 | CDD:214652 | |||
IGc2 | 5413..5481 | CDD:197706 | |||
I-set | 5542..5627 | CDD:254352 | |||
Ig | 5556..5621 | CDD:143165 | |||
Ig | 5654..5721 | CDD:143165 | |||
I-set | 5784..5874 | CDD:254352 | |||
IGc2 | 5797..5864 | CDD:197706 | |||
I-set | 5887..5970 | CDD:254352 | |||
Ig | 5902..5966 | CDD:143165 | |||
I-set | 5997..6086 | CDD:254352 | |||
Ig | 6026..6083 | CDD:143165 | |||
I-set | 6097..6187 | CDD:254352 | |||
Ig | 6114..6187 | CDD:299845 | |||
FN3 | 6216..6310 | CDD:238020 | |||
I-set | 6321..6412 | CDD:254352 | |||
Ig | 6328..6412 | CDD:299845 | |||
I-set | 6442..6531 | CDD:254352 | 27/76 (36%) | ||
Ig | 6459..6528 | CDD:143165 | 24/72 (33%) | ||
I-set | 6541..6632 | CDD:254352 | 22/92 (24%) | ||
IGc2 | 6555..6622 | CDD:197706 | 18/68 (26%) | ||
I-set | 6662..6754 | CDD:254352 | 25/91 (27%) | ||
Ig | 6679..6751 | CDD:143165 | 21/71 (30%) | ||
I-set | 6779..6868 | CDD:254352 | 22/96 (23%) | ||
IGc2 | 6793..6858 | CDD:197706 | 18/72 (25%) | ||
Ig | 6938..7022 | CDD:299845 | 24/93 (26%) | ||
I-set | 6939..7028 | CDD:254352 | 24/98 (24%) | ||
IG | 7075..7140 | CDD:214652 | 10/75 (13%) | ||
Ig | 7075..7140 | CDD:143165 | 10/75 (13%) | ||
IG | 7167..7239 | CDD:214652 | 14/74 (19%) | ||
Ig | 7173..7239 | CDD:143165 | 13/67 (19%) | ||
Ig | 7392..7475 | CDD:299845 | |||
IG | 7406..7475 | CDD:214652 | |||
FN3 | 7489..7588 | CDD:238020 | |||
S_TKc | 7620..7876 | CDD:214567 | |||
STKc_MLCK | 7626..7876 | CDD:271005 | |||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 28/82 (34%) |
I-set | 23..116 | CDD:254352 | 27/76 (36%) | ||
I-set | 122..211 | CDD:254352 | 23/112 (21%) | ||
Ig | 125..211 | CDD:299845 | 22/109 (20%) | ||
I-set | 215..302 | CDD:254352 | 27/96 (28%) | ||
Ig | 232..302 | CDD:299845 | 22/74 (30%) | ||
I-set | 306..401 | CDD:254352 | 22/94 (23%) | ||
Ig | 320..411 | CDD:299845 | 23/100 (23%) | ||
I-set | 412..492 | CDD:254352 | 23/133 (17%) | ||
IGc2 | 429..489 | CDD:197706 | 18/61 (30%) | ||
FN3 | 519..612 | CDD:238020 | 19/110 (17%) | ||
FN3 | 644..735 | CDD:238020 | 19/98 (19%) | ||
fn3 | 743..832 | CDD:278470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |