Sequence 1: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038944182.1 | Gene: | Lsamp / 29561 | RGDID: | 71102 | Length: | 378 | Species: | Rattus norvegicus |
Alignment Length: | 398 | Identity: | 91/398 - (22%) |
---|---|---|---|
Similarity: | 146/398 - (36%) | Gaps: | 103/398 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 6203 LPLDSYSDTSYFRDPPGCISTEPLVVDSGPTHISLSWGK-----PVSANSAPVMAYKVE------ 6256
Fly 6257 AWV-------VGHEGGAYWRELGLTPINSFDAFNLKPNV--------EYHFRVTPKNRYGWGP-- 6304
Fly 6305 -TVQTS---SPLQVGGVECLPEFVKILPGQAKALLGSSFTLQCNMRGAPRPQVTWFKDGIQLSSS 6365
Fly 6366 SERVKIRQIGSTCALTIATVSELDSGRYTCEATNSKGRVSTFARLQVVSDSRIYE---ADSRLKE 6427
Fly 6428 IAHGRNVADVGDSLPIFTMRLRDRRVQVTYPVRLTCQIVGYPVPEILWYKDDELIHT-DRKHLIS 6491
Fly 6492 AEGQFFTLEIAATTLDDSGTYTCLARNELGSVSCHCTLVVDKGIRAYISPDFYVPLDPFYIFREG 6556
Fly 6557 SEIRLSTK 6564 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
Ig | <69..>112 | CDD:299845 | |||
I-set | 137..226 | CDD:254352 | |||
I-set | 235..314 | CDD:254352 | |||
Ig_2 | 244..314 | CDD:290606 | |||
I-set | 438..513 | CDD:254352 | |||
Ig | 454..510 | CDD:143165 | |||
I-set | 537..626 | CDD:254352 | |||
Ig | 555..618 | CDD:299845 | |||
I-set | 636..713 | CDD:254352 | |||
Ig | 652..712 | CDD:143165 | |||
SMC_N | <2190..2854 | CDD:280601 | |||
I-set | 5300..5388 | CDD:254352 | |||
IGc2 | 5313..5378 | CDD:197706 | |||
IG | 5412..5482 | CDD:214652 | |||
IGc2 | 5413..5481 | CDD:197706 | |||
I-set | 5542..5627 | CDD:254352 | |||
Ig | 5556..5621 | CDD:143165 | |||
Ig | 5654..5721 | CDD:143165 | |||
I-set | 5784..5874 | CDD:254352 | |||
IGc2 | 5797..5864 | CDD:197706 | |||
I-set | 5887..5970 | CDD:254352 | |||
Ig | 5902..5966 | CDD:143165 | |||
I-set | 5997..6086 | CDD:254352 | |||
Ig | 6026..6083 | CDD:143165 | |||
I-set | 6097..6187 | CDD:254352 | |||
Ig | 6114..6187 | CDD:299845 | |||
FN3 | 6216..6310 | CDD:238020 | 24/125 (19%) | ||
I-set | 6321..6412 | CDD:254352 | 25/90 (28%) | ||
Ig | 6328..6412 | CDD:299845 | 24/83 (29%) | ||
I-set | 6442..6531 | CDD:254352 | 24/89 (27%) | ||
Ig | 6459..6528 | CDD:143165 | 23/69 (33%) | ||
I-set | 6541..6632 | CDD:254352 | 5/24 (21%) | ||
IGc2 | 6555..6622 | CDD:197706 | 2/10 (20%) | ||
I-set | 6662..6754 | CDD:254352 | |||
Ig | 6679..6751 | CDD:143165 | |||
I-set | 6779..6868 | CDD:254352 | |||
IGc2 | 6793..6858 | CDD:197706 | |||
Ig | 6938..7022 | CDD:299845 | |||
I-set | 6939..7028 | CDD:254352 | |||
IG | 7075..7140 | CDD:214652 | |||
Ig | 7075..7140 | CDD:143165 | |||
IG | 7167..7239 | CDD:214652 | |||
Ig | 7173..7239 | CDD:143165 | |||
Ig | 7392..7475 | CDD:299845 | |||
IG | 7406..7475 | CDD:214652 | |||
FN3 | 7489..7588 | CDD:238020 | |||
S_TKc | 7620..7876 | CDD:214567 | |||
STKc_MLCK | 7626..7876 | CDD:271005 | |||
Lsamp | XP_038944182.1 | Ig | 55..145 | CDD:416386 | 21/106 (20%) |
FR1 | 55..71 | CDD:409353 | 1/15 (7%) | ||
Ig strand A' | 56..62 | CDD:409353 | 1/5 (20%) | ||
Ig strand B | 64..72 | CDD:409353 | 0/7 (0%) | ||
CDR1 | 72..76 | CDD:409353 | 2/3 (67%) | ||
FR2 | 77..84 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 77..83 | CDD:409353 | 2/5 (40%) | ||
CDR2 | 85..95 | CDD:409353 | 3/26 (12%) | ||
Ig strand C' | 87..90 | CDD:409353 | 0/2 (0%) | ||
Ig strand C' | 92..95 | CDD:409353 | 2/19 (11%) | ||
FR3 | 96..131 | CDD:409353 | 8/34 (24%) | ||
Ig strand D | 100..107 | CDD:409353 | 1/6 (17%) | ||
Ig strand E | 110..116 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 123..131 | CDD:409353 | 1/7 (14%) | ||
CDR3 | 132..136 | CDD:409353 | 1/3 (33%) | ||
Ig strand G | 136..145 | CDD:409353 | 2/8 (25%) | ||
FR4 | 138..145 | CDD:409353 | 2/6 (33%) | ||
Ig_3 | 148..218 | CDD:404760 | 21/77 (27%) | ||
Ig strand A' | 155..160 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 166..173 | CDD:409353 | 3/6 (50%) | ||
Ig strand C | 179..184 | CDD:409353 | 2/5 (40%) | ||
Ig strand D | 190..193 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 197..203 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 210..217 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 224..232 | CDD:409353 | 1/7 (14%) | ||
Ig_3 | 235..311 | CDD:404760 | 24/101 (24%) | ||
Ig strand B | 252..256 | CDD:409353 | 1/28 (4%) | ||
Ig strand C | 265..269 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 290..294 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 304..309 | CDD:409353 | 3/4 (75%) | ||
Ig strand G | 318..321 | CDD:409353 | 0/2 (0%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |