Sequence 1: | NP_001261019.1 | Gene: | Strn-Mlck / 36753 | FlyBaseID: | FBgn0265045 | Length: | 8255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258221.1 | Gene: | Hmcn1 / 289094 | RGDID: | 1564772 | Length: | 5635 | Species: | Rattus norvegicus |
Alignment Length: | 4122 | Identity: | 857/4122 - (20%) |
---|---|---|---|
Similarity: | 1348/4122 - (32%) | Gaps: | 1300/4122 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 5109 KVATDTKSQTVEVSEIV--LEKISEEKAE--ESQKVELK---------DSEAKSKKAKVLEKKST 5160
Fly 5161 LKEKLDEN---DKKQKEDG-----------ATNKSQKAEAADVVPEKISEEKVAEIKTPEPMDSK 5211
Fly 5212 AKSKPDGLPADEKSHGAKVSESVPVKNEAEKTDQLSAKKPTVLDEDLVVPKRKPYLAEQTADSIS 5276
Fly 5277 LQTYKSMDSEYKDRKESRSAKRKPTVDIQLT----------NRNTASGSDLKLTCGLSGHEMN-- 5329
Fly 5330 ----------VQWFKDNCPIENGAKYRRTLNDGLSCLEIKSAELGDSGIYRCIASNQNGEVETSC 5384
Fly 5385 LVTIYEAPSSKFGTPPIFTRNIRDAYHSQGNQLTLECKVSGSPKPHIYWQRDNTLLPIEGTKYQY 5449
Fly 5450 EEQSDGIKLLTINNFGSNDSGLYTCYAESENG--QMKISKFVQASDYV-----------RERIAD 5501
Fly 5502 K------------KPIDKVI---QEIKRDESSSAAANDTA---------------------AAKA 5530
Fly 5531 KAREAKLRLNLETSLK------TMTIGSGNKAQLICYVTGIIEDV-HWLRNDERVTKDARHKIYN 5588
Fly 5589 INGAISLEIYDARVEDSGHYRCVVKNSRQTVESAGQLSVL----DQSTGKLPESFSSGIIESYDD 5649
Fly 5650 QRNEIVLSCQVIGR--PSVSWMRD-------DHSICNNRYRTIEEPGGVRKLVIRNPISSDCGIF 5705
Fly 5706 ACYAEHEDRIDSTSITIKAADLKRLI---------NVSQE------------------EIPSIGD 5743
Fly 5744 HESTPWSRSQSHLSSGSQ---VNGNGELHRAGDRV---------LRNV-GKGKPLFH-------- 5787
Fly 5788 -----TLLHDRTVSEGANLRLVCSVSGDENTHIEWLKNHKPLPRSDNRYQTVYLN-GEASLEIFA 5846
Fly 5847 AVADDSGNYTCCATNDFGESLTHAQLRVYKNFKEAPLPSTFTQPIRDTY--SLNENELVLDCRVR 5909
Fly 5910 GQPRPEIQWIKGTEPIEASEKFKPSDQADGY------AKLVIVNPTEKDSGIYWCVARNEGAENK 5968
Fly 5969 ISHQVDFKGRQHYSLEKTHGFFHRDPNKPHFLLPLGNQTVCNGGTVAISAEFMETSTPIEVKWLR 6033
Fly 6034 DRRVVD-GPNVKALADRGVYTLTIMNAGPEVEGTYTCRASNAFGRIESNVNVDVAVGAEKDERPP 6097
Fly 6098 LFLSRPDTEMKIAVGDPFSLSFRIAGDPKPKLTFMKGTKDITQSDRVSKEVSDDYTR----FSVQ 6158
Fly 6159 QAQISDSGTYFVVARNNFGTDRIF-----------------VTVTVNPRAR---------SATPT 6197
Fly 6198 QPRWGLPLDSY--------------------SDTSYF------------RD-------PPGCIST 6223
Fly 6224 EPLV-------------VDSGPTHISLSW---GKP--------VSANSAPVMAYKVEAWVVGHEG 6264
Fly 6265 GAYWRELGLTPINSFDAFNLKPNVEYHFRV---TPKNRYGWGPTVQTSS---------------- 6310
Fly 6311 ----------------------------PLQVGGVE--------CL---------PEF---VKIL 6327
Fly 6328 PGQAKA---------LLGSSFTLQCNMRGAPRPQVTWFKDGIQLSSSSERVKIRQIGSTCALTIA 6383
Fly 6384 TVSELDSGRYTCEATNSKGR--------------------------------------------- 6403
Fly 6404 ----------VSTFARLQVVSDSRIYEADSRLKEIAHG-----RNVADVGDSLPIFTM------- 6446
Fly 6447 -----RLRDRRVQVTYPVRLTCQIVGYPVPEILWYKDDELIHTDRKHLISAEGQFFTLEIAATTL 6506
Fly 6507 DDSGTYTCLARNELGSVSCHCTLVVDKGIRAYISPDFY------VPLDPFYIFREGSEIRLSTKV 6565
Fly 6566 EAYPSVGVTWHRNGMRLRPSRRLTATLDSNGYVELIIAEATVRDAGIYVCVASNVVGKVETICRV 6630
Fly 6631 AVEEAENKAVAPQRSLEIPSIKTDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPEVVW 6695
Fly 6696 LRDFLNPEYYKDAPHFRRIGDGPEYRLEIPSAKLDFTGTYSVIASNCHGEAKAVISLQIFAKDIL 6760
Fly 6761 NKSRMDKVHTRHGNIETLPRF-----VRNL----RNLRCCD---GDAISLECHVEADPEPFIIWE 6813
Fly 6814 KDGHVMPSDRDYVMSFDGTKATLSIPRVYPEDEGEYTCVAKNSVGRSLSSACIIV---------- 6868
Fly 6869 -DVPEEKENMLSRQLARPSGLLSAHSTPRSTPRSTPARSFSPLR-------------LSYRTSSI 6919
Fly 6920 DLSG----VAERRRSDARN----------AITAP--KFLAIPYNRVVEEGDSVRFQCAISGHPTP 6968
Fly 6969 WATWDKDGLIVTPTPRIAVKEIDDLRIIEIDEVTFDDAGLYRVTLENDFG----RIEATARLDVI 7029
Fly 7030 RSSRYSKSPSVRSVRASSS-----------------------------------------RR--- 7050
Fly 7051 -----------------------NAHLYRRIMGPSTAI-----GGRMALASGYRGSSVPSVRFYH 7087
Fly 7088 NDVELEASE--RVHILLQDSMALLIVDNVTREDEGQYTCIISG---------------------- 7128
Fly 7129 --------------------------------DHDPLITSTT----VTFHDSNTEIRRR------ 7151
Fly 7152 --RAVIT------ERL--------PEITKSLEG-----EVIDLCCSIEC----DEPYSYVWLRNG 7191
Fly 7192 EILPDSDEFNYIDHGNG-RL------------CLRINDAFDIDSGIYSCQVF----------TSD 7233
Fly 7234 I----NDSTSDSTF--------------------DSH-------SICSLINSGCSD-----CSSS 7262
Fly 7263 GE---------LCVLE----RDLRGQDEECVQLLKTPLPVVC-ASGDEA-----LFYARVFPCDA 7308
Fly 7309 EADWYLNGQLL----AQADDSLNMT-LESYP---ENGIRLLRM------------RDVTASRSGE 7353
Fly 7354 ICLQVKHPQAEFRRIPTTRTYTSLLVLPAIR----------GNSSSSSLAARSCILTR------- 7401
Fly 7402 ---------------PEDCTALIGGHVRLSVRYEPFPGTKVIWYKACHPIVES-SNVTIRTTSQQ 7450
Fly 7451 STLYITDISADDSGKYTVEVMNDYGVEAAAASVAVEGPPEPPSGQPSVSLGPDRVAVAWCGPPYD 7515
Fly 7516 GGCMITGF---IIEMQTIG-----DENCDEDSWQQVTRVVDSLAYTVKNLQPERQYRFRVRAENI 7572
Fly 7573 HGRSAPGQASELVQITNTPQRSTSSDASD----RFGQATVSVQSGGD-------FKSRFEIIEEL 7626
Fly 7627 GKGRFGIVYKVQERGQPE----QLLAAKVIKCIKSQDRQKVLEEISIMRALQHPKLLQLAASFES 7687
Fly 7688 PREIVMVM-------------------------EYITGG-----------ELFERVVADDFTL-- 7714
Fly 7715 -------TEMDCILFLRQVCDGVAYMHGQSVVHLDLKPENIMCHTRTSHQIKI--------IDFG 7764
Fly 7765 LAQRLDTKAPVRVLFGTPE------------------------FIPPEIISYEPIGFQSDMWSVG 7805
Fly 7806 VICY---------------VLLSGLSPFMGDTDVETFSNITRADYDYDDE-AFDCVSQEAKDFIS 7854
Fly 7855 QLLVHRKEDRLTAQQCL-ASKWLSQRPDDSLSNNKICTDKLKKFIIRRKWQKTGNAIRALGRMAN 7918
Fly 7919 LSVSRRNSAIAMGVLSSPRPSISGLGMLTTSAIGSGTSSQMTSLHE---------------EEDD 7968
Fly 7969 FSGEMP-----PVEKRTVLKLRDKS---------------QCSER----------------SDSG 7997
Fly 7998 YSEC--SNCSGAQE-TLLLSLAKSKLEAIAKASTLPTVVHDTEQPVSLELPTKGE---AIMRS-- 8054
Fly 8055 ----DFTNTIKM-RKKSLEDSAAREKPRSKPQ--VKPLLCESKLKVS---QLKDRFQVSPAPASA 8109
Fly 8110 SAS--------ASAANKPPLAYGPFKIAKVASVGRISRT---------------EEPGRSGRGAP 8151
Fly 8152 SVSGKGKSPQVRSMPSSPLPQRSATPTRLMSQRVREAAERLAQQHTV-------ASAQRHLGNGR 8209
Fly 8210 GTGTGNGNGNSNSNGNGNGNTAETNRE 8236 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Strn-Mlck | NP_001261019.1 | IG_like | 51..127 | CDD:214653 | |
Ig | <69..>112 | CDD:299845 | |||
I-set | 137..226 | CDD:254352 | |||
I-set | 235..314 | CDD:254352 | |||
Ig_2 | 244..314 | CDD:290606 | |||
I-set | 438..513 | CDD:254352 | |||
Ig | 454..510 | CDD:143165 | |||
I-set | 537..626 | CDD:254352 | |||
Ig | 555..618 | CDD:299845 | |||
I-set | 636..713 | CDD:254352 | |||
Ig | 652..712 | CDD:143165 | |||
SMC_N | <2190..2854 | CDD:280601 | |||
I-set | 5300..5388 | CDD:254352 | 24/109 (22%) | ||
IGc2 | 5313..5378 | CDD:197706 | 17/76 (22%) | ||
IG | 5412..5482 | CDD:214652 | 23/71 (32%) | ||
IGc2 | 5413..5481 | CDD:197706 | 22/67 (33%) | ||
I-set | 5542..5627 | CDD:254352 | 25/91 (27%) | ||
Ig | 5556..5621 | CDD:143165 | 24/65 (37%) | ||
Ig | 5654..5721 | CDD:143165 | 19/75 (25%) | ||
I-set | 5784..5874 | CDD:254352 | 29/103 (28%) | ||
IGc2 | 5797..5864 | CDD:197706 | 23/67 (34%) | ||
I-set | 5887..5970 | CDD:254352 | 30/90 (33%) | ||
Ig | 5902..5966 | CDD:143165 | 27/69 (39%) | ||
I-set | 5997..6086 | CDD:254352 | 24/89 (27%) | ||
Ig | 6026..6083 | CDD:143165 | 19/57 (33%) | ||
I-set | 6097..6187 | CDD:254352 | 26/110 (24%) | ||
Ig | 6114..6187 | CDD:299845 | 24/93 (26%) | ||
FN3 | 6216..6310 | CDD:238020 | 26/127 (20%) | ||
I-set | 6321..6412 | CDD:254352 | 36/157 (23%) | ||
Ig | 6328..6412 | CDD:299845 | 33/147 (22%) | ||
I-set | 6442..6531 | CDD:254352 | 32/100 (32%) | ||
Ig | 6459..6528 | CDD:143165 | 28/68 (41%) | ||
I-set | 6541..6632 | CDD:254352 | 27/96 (28%) | ||
IGc2 | 6555..6622 | CDD:197706 | 22/66 (33%) | ||
I-set | 6662..6754 | CDD:254352 | 20/91 (22%) | ||
Ig | 6679..6751 | CDD:143165 | 19/71 (27%) | ||
I-set | 6779..6868 | CDD:254352 | 35/100 (35%) | ||
IGc2 | 6793..6858 | CDD:197706 | 28/64 (44%) | ||
Ig | 6938..7022 | CDD:299845 | 18/89 (20%) | ||
I-set | 6939..7028 | CDD:254352 | 19/94 (20%) | ||
IG | 7075..7140 | CDD:214652 | 19/124 (15%) | ||
Ig | 7075..7140 | CDD:143165 | 19/124 (15%) | ||
IG | 7167..7239 | CDD:214652 | 29/107 (27%) | ||
Ig | 7173..7239 | CDD:143165 | 27/96 (28%) | ||
Ig | 7392..7475 | CDD:299845 | 18/105 (17%) | ||
IG | 7406..7475 | CDD:214652 | 15/69 (22%) | ||
FN3 | 7489..7588 | CDD:238020 | 20/106 (19%) | ||
S_TKc | 7620..7876 | CDD:214567 | 59/353 (17%) | ||
STKc_MLCK | 7626..7876 | CDD:271005 | 59/347 (17%) | ||
Hmcn1 | NP_001258221.1 | VWA_2 | 42..212 | CDD:290253 | |
I-set | 520..608 | CDD:254352 | |||
ig | 524..606 | CDD:278476 | |||
I-set | 612..696 | CDD:254352 | |||
Ig | 626..696 | CDD:299845 | |||
I-set | 702..789 | CDD:254352 | |||
Ig | 716..789 | CDD:299845 | |||
Ig | 792..884 | CDD:299845 | 4/11 (36%) | ||
IG_like | 799..884 | CDD:214653 | 4/11 (36%) | ||
I-set | 890..977 | CDD:254352 | 15/86 (17%) | ||
IGc2 | 903..967 | CDD:197706 | 8/63 (13%) | ||
Ig | 980..1071 | CDD:299845 | 22/120 (18%) | ||
IG | 994..1068 | CDD:214652 | 19/101 (19%) | ||
I-set | 1085..1167 | CDD:254352 | 20/84 (24%) | ||
Ig | 1086..1167 | CDD:299845 | 20/83 (24%) | ||
I-set | 1171..1258 | CDD:254352 | 26/98 (27%) | ||
Ig | 1188..1255 | CDD:143165 | 22/70 (31%) | ||
Ig | 1261..1357 | CDD:299845 | 15/95 (16%) | ||
I-set | 1267..1355 | CDD:254352 | 13/87 (15%) | ||
I-set | 1368..1448 | CDD:254352 | 24/81 (30%) | ||
Ig | 1380..1448 | CDD:299845 | 23/69 (33%) | ||
IG | 1460..1541 | CDD:214652 | 24/102 (24%) | ||
IGc2 | 1470..1532 | CDD:197706 | 19/76 (25%) | ||
IG_like | 1557..1633 | CDD:214653 | 13/81 (16%) | ||
Ig | 1565..1632 | CDD:143165 | 12/72 (17%) | ||
I-set | 1645..1729 | CDD:254352 | 29/94 (31%) | ||
Ig | 1648..1725 | CDD:299845 | 27/87 (31%) | ||
I-set | 1752..1822 | CDD:254352 | 28/93 (30%) | ||
Ig | 1754..1815 | CDD:299845 | 26/69 (38%) | ||
IG | 1834..1915 | CDD:214652 | 23/84 (27%) | ||
IGc2 | 1843..1905 | CDD:197706 | 19/63 (30%) | ||
IG_like | 1929..2008 | CDD:214653 | 23/84 (27%) | ||
IGc2 | 1935..1998 | CDD:197706 | 20/68 (29%) | ||
I-set | 2012..2100 | CDD:254352 | 15/87 (17%) | ||
Ig | 2021..2092 | CDD:299845 | 13/70 (19%) | ||
I-set | 2111..2191 | CDD:254352 | 17/94 (18%) | ||
IGc2 | 2119..2181 | CDD:197706 | 14/76 (18%) | ||
I-set | 2203..2286 | CDD:254352 | 7/82 (9%) | ||
IGc2 | 2210..2276 | CDD:197706 | 4/65 (6%) | ||
Ig | 2299..2380 | CDD:299845 | 29/83 (35%) | ||
IG_like | 2300..2380 | CDD:214653 | 29/82 (35%) | ||
I-set | 2392..2474 | CDD:254352 | 11/83 (13%) | ||
IGc2 | 2400..2464 | CDD:197706 | 9/65 (14%) | ||
I-set | 2478..2567 | CDD:254352 | 31/90 (34%) | ||
IGc2 | 2493..2557 | CDD:197706 | 26/65 (40%) | ||
I-set | 2582..2663 | CDD:254352 | 27/92 (29%) | ||
IGc2 | 2594..2653 | CDD:197706 | 21/61 (34%) | ||
I-set | 2681..2762 | CDD:254352 | 20/106 (19%) | ||
Ig | 2688..2762 | CDD:299845 | 19/99 (19%) | ||
IG_like | 2789..2865 | CDD:214653 | 30/77 (39%) | ||
IGc2 | 2791..2855 | CDD:197706 | 28/65 (43%) | ||
I-set | 2879..2960 | CDD:254352 | 16/85 (19%) | ||
Ig | 2879..2950 | CDD:299845 | 15/75 (20%) | ||
IG | 2972..3052 | CDD:214652 | 17/87 (20%) | ||
IGc2 | 2982..3042 | CDD:197706 | 14/67 (21%) | ||
IG | 3069..3147 | CDD:214652 | 5/77 (6%) | ||
IGc2 | 3073..3137 | CDD:197706 | 3/63 (5%) | ||
IG | 3150..3241 | CDD:214652 | 21/92 (23%) | ||
Ig | 3150..3241 | CDD:299845 | 21/92 (23%) | ||
Ig | 3244..3338 | CDD:299845 | 11/93 (12%) | ||
I-set | 3252..3336 | CDD:254352 | 11/83 (13%) | ||
I-set | 3354..3430 | CDD:254352 | 22/76 (29%) | ||
IGc2 | 3357..3420 | CDD:197706 | 17/63 (27%) | ||
Ig | 3433..3523 | CDD:299845 | 15/89 (17%) | ||
IG_like | 3443..3523 | CDD:214653 | 14/79 (18%) | ||
IG_like | 3535..3616 | CDD:214653 | 21/81 (26%) | ||
IGc2 | 3543..3606 | CDD:197706 | 18/62 (29%) | ||
I-set | 3629..3709 | CDD:254352 | 12/79 (15%) | ||
IGc2 | 3636..3699 | CDD:197706 | 9/62 (15%) | ||
I-set | 3713..3800 | CDD:254352 | 17/89 (19%) | ||
Ig | 3719..3795 | CDD:299845 | 17/78 (22%) | ||
Ig | 3823..3889 | CDD:143165 | 13/76 (17%) | ||
I-set | 3897..3984 | CDD:254352 | 16/94 (17%) | ||
IGc2 | 3913..3974 | CDD:197706 | 13/66 (20%) | ||
Ig | 3993..4066 | CDD:299845 | 8/72 (11%) | ||
IG_like | 3994..4075 | CDD:214653 | 10/80 (13%) | ||
IG_like | 4085..4165 | CDD:214653 | 13/80 (16%) | ||
IGc2 | 4092..4155 | CDD:197706 | 11/63 (17%) | ||
Ig | 4168..4258 | CDD:299845 | 19/102 (19%) | ||
IG | 4177..4256 | CDD:214652 | 14/91 (15%) | ||
I-set | 4260..4345 | CDD:254352 | 13/103 (13%) | ||
IGc2 | 4274..4335 | CDD:197706 | 7/60 (12%) | ||
IG_like | 4356..4435 | CDD:214653 | 12/78 (15%) | ||
IGc2 | 4364..4426 | CDD:197706 | 8/61 (13%) | ||
I-set | 4440..4526 | CDD:254352 | 18/89 (20%) | ||
Ig | 4440..4521 | CDD:299845 | 17/84 (20%) | ||
TSP1 | 4533..4584 | CDD:214559 | 10/50 (20%) | ||
TSP1 | 4589..4641 | CDD:214559 | 12/59 (20%) | ||
TSP1 | 4646..4698 | CDD:214559 | 12/45 (27%) | ||
TSP1 | 4703..4755 | CDD:214559 | |||
TSP1 | 4760..4812 | CDD:214559 | |||
TSP1 | 4817..4869 | CDD:214559 | |||
G2F | 4868..5092 | CDD:214774 | |||
EGF_CA | 5107..5146 | CDD:214542 | |||
EGF_CA | 5147..5190 | CDD:284955 | |||
EGF_CA | 5192..5229 | CDD:214542 | |||
EGF_CA | 5230..5263 | CDD:238011 | |||
EGF_CA | 5272..5313 | CDD:284955 | |||
EGF_CA | 5315..5354 | CDD:214542 | |||
EGF_CA | 5432..5471 | CDD:214542 | |||
EGF_CA | 5472..5508 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |