DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strn-Mlck and ketn-1

DIOPT Version :9

Sequence 1:NP_001261019.1 Gene:Strn-Mlck / 36753 FlyBaseID:FBgn0265045 Length:8255 Species:Drosophila melanogaster
Sequence 2:NP_001294668.1 Gene:ketn-1 / 178740 WormBaseID:WBGene00004130 Length:4963 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Strn-MlckNP_001261019.1 IG_like 51..127 CDD:214653
Ig <69..>112 CDD:299845
I-set 137..226 CDD:254352
I-set 235..314 CDD:254352
Ig_2 244..314 CDD:290606
I-set 438..513 CDD:254352
Ig 454..510 CDD:143165
I-set 537..626 CDD:254352
Ig 555..618 CDD:299845
I-set 636..713 CDD:254352
Ig 652..712 CDD:143165
SMC_N <2190..2854 CDD:280601
I-set 5300..5388 CDD:254352
IGc2 5313..5378 CDD:197706
IG 5412..5482 CDD:214652
IGc2 5413..5481 CDD:197706
I-set 5542..5627 CDD:254352
Ig 5556..5621 CDD:143165
Ig 5654..5721 CDD:143165
I-set 5784..5874 CDD:254352
IGc2 5797..5864 CDD:197706
I-set 5887..5970 CDD:254352
Ig 5902..5966 CDD:143165
I-set 5997..6086 CDD:254352
Ig 6026..6083 CDD:143165
I-set 6097..6187 CDD:254352
Ig 6114..6187 CDD:299845
FN3 6216..6310 CDD:238020
I-set 6321..6412 CDD:254352
Ig 6328..6412 CDD:299845
I-set 6442..6531 CDD:254352
Ig 6459..6528 CDD:143165
I-set 6541..6632 CDD:254352
IGc2 6555..6622 CDD:197706
I-set 6662..6754 CDD:254352
Ig 6679..6751 CDD:143165
I-set 6779..6868 CDD:254352
IGc2 6793..6858 CDD:197706
Ig 6938..7022 CDD:299845
I-set 6939..7028 CDD:254352
IG 7075..7140 CDD:214652
Ig 7075..7140 CDD:143165
IG 7167..7239 CDD:214652
Ig 7173..7239 CDD:143165
Ig 7392..7475 CDD:299845
IG 7406..7475 CDD:214652
FN3 7489..7588 CDD:238020
S_TKc 7620..7876 CDD:214567
STKc_MLCK 7626..7876 CDD:271005
ketn-1NP_001294668.1 I-set 3720..3806 CDD:254352
Ig 3740..3806 CDD:143165
I-set 3821..3914 CDD:254352
Ig 3822..3914 CDD:299845
I-set 3962..4052 CDD:254352
Ig 3989..4050 CDD:143165
I-set 4098..4184 CDD:254352
Ig 4105..4184 CDD:299845
I-set 4546..4635 CDD:254352
Ig 4567..4635 CDD:299845
I-set 4645..4734 CDD:254352
Ig 4662..4734 CDD:299845
I-set 4752..4839 CDD:254352
Ig 4769..4838 CDD:143165
I-set 4872..4960 CDD:254352
Ig 4875..4960 CDD:299845
I-set 18..106 CDD:254352
Ig 21..101 CDD:299845
I-set 136..224 CDD:254352
Ig 153..218 CDD:299845
I-set 303..393 CDD:254352
Ig 305..387 CDD:299845
Ig 705..795 CDD:299845
I-set 706..797 CDD:254352
I-set 806..894 CDD:254352
IGc2 820..884 CDD:197706
I-set 937..1028 CDD:254352
Ig 965..1025 CDD:143165
I-set 1065..1156 CDD:254352
Ig 1092..1153 CDD:143165
I-set 1190..1281 CDD:254352
Ig 1218..1279 CDD:143165
I-set 1328..1420 CDD:254352
Ig 1361..1416 CDD:299845
I-set 1462..1554 CDD:254352
Ig 1463..1543 CDD:299845
I-set 1595..1685 CDD:254352
Ig 1616..1685 CDD:143165
I-set 1728..1816 CDD:254352
Ig 1755..1816 CDD:143165
IG_like 1872..1953 CDD:214653
Ig 1872..1948 CDD:299845
I-set 1993..2085 CDD:254352
IGc2 2008..2076 CDD:197706
I-set 2126..2217 CDD:254352
IGc2 2140..2208 CDD:197706
I-set 2258..2351 CDD:254352
Ig 2286..2348 CDD:143165
DUF1136 2357..2382 CDD:284093
I-set 2391..2482 CDD:254352
IGc2 2413..2472 CDD:197706
DUF1136 2488..2514 CDD:284093
Ig 2521..2615 CDD:299845
I-set 2522..2612 CDD:254352
DUF1136 2620..2645 CDD:284093
I-set 2654..2746 CDD:254352
Ig 2682..2743 CDD:143165
DUF1136 2752..2776 CDD:284093
IG_like 2799..2878 CDD:214653
Ig 2805..2876 CDD:143165
DUF1136 2885..>2905 CDD:284093
I-set 2919..3011 CDD:254352
Ig 2949..3011 CDD:299845
I-set 3051..3141 CDD:254352
Ig 3078..3139 CDD:143165
I-set 3182..3274 CDD:254352
Ig 3204..3270 CDD:299845
IG 3327..3406 CDD:214652
Ig 3343..3403 CDD:143165
I-set 3448..3539 CDD:254352
Ig 3476..3537 CDD:143165
I-set 3584..3676 CDD:254352
Ig 3602..3673 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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