DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and CPD

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_196188.1 Gene:CPD / 830453 AraportID:AT5G05690 Length:472 Species:Arabidopsis thaliana


Alignment Length:540 Identity:112/540 - (20%)
Similarity:202/540 - (37%) Gaps:132/540 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LSIYTFYATLNTYLRSVLLSLRLTG------PP---SLPFLGNCMLV------------TDKDLM 69
            ::...|...|::.....||.||.|.      ||   .||.:|....:            .|:.:.
plant     1 MAFTAFLLLLSSIAAGFLLLLRRTRYRRMGLPPGSLGLPLIGETFQLIGAYKTENPEPFIDERVA 65

  Fly    70 RRCAGKAFDLYGSLVRIWVLLFPFFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLG-DGLITSS 133
            |         |||:....:...|.....:||..:.:|.::....:..:...:.|.|| ..|:...
plant    66 R---------YGSVFMTHLFGEPTIFSADPETNRFVLQNEGKLFECSYPASICNLLGKHSLLLMK 121

  Fly   134 GSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYEN---LDAEAVGTEINIAKYVNNCVLDILN 195
            ||.   |:|:      |:|...|      |:.|:.::   ||.:.: ...|:..:.:..:|  :.
plant   122 GSL---HKRM------HSLTMSF------ANSSIIKDHLMLDIDRL-VRFNLDSWSSRVLL--ME 168

  Fly   196 EAVLGVPIKKRGQDVAMMEDSPFRQGK----------IMMPARFTQPWLLLDGIYHWTKMANDEL 250
            ||      ||...::.:.:...|..|:          :::...|:.|..|....|          
plant   169 EA------KKITFELTVKQLMSFDPGEWSESLRKEYLLVIEGFFSLPLPLFSTTY---------- 217

  Fly   251 NQKKRLNDFTRKMIQRRRQI-----------QNNNNGNSERKCLLDHMIEISESNRDFTEEDIVN 304
                      ||.||.||::           :......:|||  .|.:..:..::..|::|:||:
plant   218 ----------RKAIQARRKVAEALTVVVMKRREEEEEGAERK--KDMLAALLAADDGFSDEEIVD 270

  Fly   305 EACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTM---------TDLHE 360
            .....::||.::....:...:..||:.|       |.||.:.|:..:...|         :|...
plant   271 FLVALLVAGYETTSTIMTLAVKFLTETP-------LALAQLKEEHEKIRAMKSDSYSLEWSDYKS 328

  Fly   361 MRYMEMCIKEALRLYPSVPLIARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPE 425
            |.:.:..:.|.||:...:..:.|:...:|.:..:.:|.|..||    ::.|..|:  ||..|:..
plant   329 MPFTQCVVNETLRVANIIGGVFRRAMTDVEIKGYKIPKGWKVF----SSFRAVHL--DPNHFKDA 387

  Fly   426 R-FSP----ENSENRHP-YAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAA 484
            | |:|    .||....| ..|.||..|||.|.|...|.:.:...:.||:..:..:|......:  
plant   388 RTFNPWRWQSNSVTTGPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTGFSWVPAEQDKLV-- 450

  Fly   485 TFRITLRASGGLWVRLKERD 504
             |..|.|......:.:|.||
plant   451 -FFPTTRTQKRYPIFVKRRD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 94/456 (21%)
CPDNP_196188.1 PLN02987 1..472 CDD:166628 112/540 (21%)

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