DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_006524820.1 Gene:Cyp4f40 / 631304 MGIID:3645508 Length:551 Species:Mus musculus


Alignment Length:534 Identity:147/534 - (27%)
Similarity:247/534 - (46%) Gaps:87/534 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LILLVISLS---------IYTFYATLNTYLRSVLLSLRLTGPPSLP----FLGNCMLVTDKDLMR 70
            |:..::.:|         :||.||...          ||.|.|..|    |.|:..:....:...
Mouse    47 LLFFLVGISWFLARFLTQLYTLYAKCQ----------RLCGFPQPPKKNWFWGHLGMSPPTEEGM 101

  Fly    71 RCAGKAFDLYGSLVRIWV-LLFPFFAVLEPEDLQVILSSKKHT--NKVFFYRLMHNFLGDGLITS 132
            :...:....|......|: .:.|...:..|:.::.:||:....  ....||..:..:|||||:.|
Mouse   102 KQVTELVTTYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPKDDIFYSFLKPWLGDGLLVS 166

  Fly   133 SGSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDAEAVG--TEINIAKYVNNCVLDILN 195
            :|.||:.|||::.||||.|:|:.::..|.|::..::......|.|  |.:|:.:.::...||.|.
Mouse   167 AGDKWNRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSTRLNMFENISLMTLDTLQ 231

  Fly   196 EAV--------------------LGVPIKKRGQDVAMMEDSPFRQGKIMMPARFTQPWLLLDGIY 240
            :.|                    |.....||.:.:.|..|..:|              |..||:.
Mouse   232 KCVFSFNSNCQEKPSQYIAAILELSTLAVKRNEQLLMHVDLLYR--------------LTPDGMR 282

  Fly   241 HWTKMANDELNQKKRLNDFTRKMIQRRRQIQNNNNGNSERKC-----LLDH----MIEISESNRD 296
            .:...        :.::|||..:||.||:....:.|:...|.     .||.    ::...|..::
Mouse   283 FYKAC--------RLVHDFTDAVIQERRRTLLKHGGDDIIKAKAKSKTLDFIDVLLLTKDEDGKE 339

  Fly   297 FTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAP---TMTDL 358
            .::|||..||.|||..|.|:..:.:::.|:.|.::||.|:||..|:..:..|  |.|   ...||
Mouse   340 LSDEDIRAEADTFMFRGHDTTASGLSWILYNLARHPEHQERCRQEVQELLRD--RDPKEIEWDDL 402

  Fly   359 HEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAK-HTLPAGSNVFICPYATHRLAHIYPDPEKF 422
            .::.::.|||||:|||:|.|.:::|...:::.|.. ..:|.|....|..:.||....::.|||.:
Mouse   403 AQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRIIPKGVICIINIFGTHHNPTVWRDPEVY 467

  Fly   423 QPERFSPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFR 487
            .|.||.|||.:.|.|.:|:|||||||.|||..||:.|:|..::..|..:::||...:.....  .
Mouse   468 DPFRFDPENIQARSPLSFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRILPDDKEPRRKP--E 530

  Fly   488 ITLRASGGLWVRLK 501
            :.|||.||||:|::
Mouse   531 LILRAEGGLWLRVE 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 131/454 (29%)
Cyp4f40XP_006524820.1 CYP4F 101..542 CDD:410772 133/466 (29%)

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