DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4aa1 and cyp4v2b

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001073465.2 Gene:cyp4v2b / 562008 ZFINID:ZDB-GENE-061103-88 Length:510 Species:Danio rerio


Alignment Length:511 Identity:168/511 - (32%)
Similarity:270/511 - (52%) Gaps:42/511 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SILILLVISLSIYTFYATLNTYLRSVLLSLRLTG-PPSLPFLGNCMLVTDKDLMRRCAGKAFD-- 78
            ::|:||:.|    |.|..|..|:........:.| ..:.|.:||.:      ..:..||..|:  
Zfish    16 AVLLLLLAS----TAYNPLKNYIGKWNEMRPIPGMAGAYPIIGNAL------QFKTNAGDFFNQI 70

  Fly    79 LYGS-------LVRIWVLLFPFFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLGDGLITSSGSK 136
            :.|:       |.::||...||..:...|:::|:||:.:|.:|.:.||.:|.:||.||:||:|.|
Zfish    71 IEGTNENRHLPLAKVWVGPVPFLILYHAENIEVVLSNSRHLDKSYSYRFLHPWLGTGLLTSTGEK 135

  Fly   137 WSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEAVLGV 201
            |.|.|:::.|.||.::|..|::...:.:..|.:.:.....|...|...::..|.|||:.|..:|.
Zfish   136 WRNRRKMLTPTFHFSILSDFLEVMNEQTDILIQKMQKLEDGEPFNCFNFITLCALDIICETAMGK 200

  Fly   202 PIKKRG-------QDVAMMEDSPFRQGKIMMPARFTQPWLLLDGIYHWTKMANDELNQKKRLNDF 259
            .|..:.       |.|..|.|        ::..|...|||..|.||:..|...:...:.|.|:.|
Zfish   201 KIYAQSNADSEYVQSVYKMSD--------IITKRQRAPWLWPDWIYNKLKEGKEHAKRLKILHSF 257

  Fly   260 TRKMIQRRRQI------QNNNNGNSERKCLLDHMIEIS-ESNRDFTEEDIVNEACTFMLAGQDSV 317
            |..:|:.|.:.      .:::.|..:|:..||.:::.: |:.:..:.|||..|..|||..|.|:.
Zfish   258 TANVIRERAEFMSSEPDSDSDQGGRKRQAFLDMLLKTTYENGQKLSHEDIQEEVDTFMFEGHDTT 322

  Fly   318 GAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIA 382
            .|::.:.|.|:..:||.|.....||..:|..|.|...:.||.::||:|..|||:||::|||||.|
Zfish   323 AASMNWALHLIGSHPEVQKAVQAELQEVFGSSERHVGVEDLKKLRYLECVIKESLRIFPSVPLFA 387

  Fly   383 RKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYAFLPFSAGP 447
            |.:.|...:....:|.|.|..|.|||.||....:|:||:||||||.||||:.|||||::||||||
Zfish   388 RSICEACHINGFKVPKGVNAVIIPYALHRDPRYFPEPEEFQPERFMPENSKGRHPYAYIPFSAGP 452

  Fly   448 RYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVRLKER 503
            |.|||.|||:||.|.:::.:||.:.:.....:..:.....:.||...|:|::|:.|
Zfish   453 RNCIGQRFAMMEEKVVLATILRHFDVEACQSREELRPLGELILRPEKGIWIKLQRR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 150/437 (34%)
cyp4v2bNP_001073465.2 None

Return to query results.
Submit another query.