DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and Cyp4f17

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001178915.1 Gene:Cyp4f17 / 500801 RGDID:1561655 Length:524 Species:Rattus norvegicus


Alignment Length:518 Identity:151/518 - (29%)
Similarity:262/518 - (50%) Gaps:57/518 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILLVISLS---------IYTFYATLNTYLRSVLLSLR-LTGPPSLP-FLGNCMLVTDKDLMRRCA 73
            :|||:..|         |..||   :.|.|     || ...|||.. |.|:..||.:.:...:..
  Rat    21 LLLVVGTSLLLARILAWISAFY---DNYCR-----LRCFPQPPSRHWFWGHLNLVKNNEEGLQLL 77

  Fly    74 GKAFDLYGSLVRIWV-LLFPFFAVLEPEDLQVILSSKKHT--NKVFFYRLMHNFLGDGLITSSGS 135
            .:....:..:...|: :.:|...::.|:.:..||.:....  .::.||..:..:|||||:.|:|.
  Rat    78 AEMSHQFQDIHLCWIGIFYPILRLIHPKFIGPILQAPAAVAPKEMIFYGFLKPWLGDGLLVSAGE 142

  Fly   136 KWSNHRRLIQPAFHHNLLEKFIDTF---VDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEA 197
            |||..|||:.||||.::|:.::..|   |:...:.::.|.|:. ...:::.::::...||.|.:.
  Rat   143 KWSRQRRLLTPAFHFDILKPYVKNFNKSVNIMHAKWQRLTAKG-SARLDMFEHISLMTLDSLQKC 206

  Fly   198 VLGVPIKKRGQDVAMMEDSP------FRQGKIMMPARFTQPWLLLDGIYHWTKMANDELNQKKRL 256
            |....        :..::||      .::...::..|..||:|.:|.:|:.|............:
  Rat   207 VFSFD--------SNCQESPSEYIAAIQELSSLIVKRHHQPFLYMDFLYYLTADGRRFRKACDLV 263

  Fly   257 NDFTRKMIQRRRQIQNNNNGN----SERKCLLDHMIEI-----SESNRDFTEEDIVNEACTFMLA 312
            ::||..:|:.||:..::.:.:    |:.|......|::     .|..::.::|||..||.|||..
  Rat   264 HNFTDAVIRERRRTLSSQSVDEFLKSKTKSKTLDFIDVLLLAKDEHGKELSDEDIRAEADTFMFG 328

  Fly   313 GQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAP---TMTDLHEMRYMEMCIKEALRL 374
            |.|:..:|:::.|:.|.::||.|:||..|:..:..|  |.|   ...||.::.::.|||||:|||
  Rat   329 GHDTTASALSWILYNLARHPEHQERCRQEVRELLRD--REPEEIEWDDLTQLPFLTMCIKESLRL 391

  Fly   375 YPSVPLIARKLGEEVRLAK-HTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPY 438
            :|.|.:|:|...::|.|.. ..:|.|::..|..:..|....::||||.:.|.||..||.:.|.|.
  Rat   392 HPPVTVISRCCTQDVVLPDGRVIPKGNDCIISIFGVHHNPSVWPDPEVYDPFRFDSENPQKRSPL 456

  Fly   439 AFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVRLK 501
            ||:|||||||.|||..||:.|:|..|:..|..::|||...:.....  .:.|||.||||:|::
  Rat   457 AFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLPDDKEPRRKP--ELILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 131/441 (30%)
Cyp4f17NP_001178915.1 CYP4F 74..515 CDD:410772 132/453 (29%)

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