Protein Alignment Cyp4aa1 and shd

DIOPT Version :10

• Sequence 1: NP_611067.2
• Gene: Cyp4aa1 / 36752
• FlyBaseID: FBgn0034053
• Length: 510
• Species: Drosophila melanogaster
• Sequence 2: NP_996074.1
• Gene: shd / 39592
• FlyBaseID: FBgn0003388
• Length: 540
• Species: Drosophila melanogaster
• Alignment Length: 565
• Identity: 123/565 - (21%)
• Similarity: 222/565 - (39%)
• Gaps: 106/565 - (18%)

  Fly    17 SILILLVISLSIYTFYA-----TLNTYLRSVLLSLRL------------------------TGPP 52
            ::::||.::|.:..:.|     ..:.|||.:|.:..|                        .||.
  Fly     2 AVILLLALALVLGCYCALHRHKLADIYLRPLLKNTLLEDFYHAELIQPEAPKRRRRGIWDIPGPK 66

  Fly    53 SLPFLGN---CMLVTDKDLMRRCAGKAFDL---YGSLV-RIWVLLFPFFAVLEPEDLQVILSSKK 110
            .:||||.   .:|...:..|.:......||   ||.:| .:.....|...:...:||:.:|   |
  Fly    67 RIPFLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEKVL---K 128

  Fly   111 HTNK---------VFFYRLMH--NFLGDGLITSSGSKWSNHR----------RLIQ---PAFHHN 151
            :.:|         :..||...  .:...|::...|..|...|          |::|   ||
  Fly   129 YPSKYPFRPPTEIIVMYRQSRPDRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPA---- 189

  Fly   152 LLEKFIDTFVDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEAVLGVPIKKRGQDVAMMEDS 216
             |....|.|::.   |....|.:.:... |..:..|...|    |||..:.:.:|...:|:....
  Fly   190 -LNAVCDDFIEL---LRARRDPDTLVVP-NFEELANLMGL----EAVCTLMLGRRMGFLAIDTKQ 245

  Fly   217 PFRQGKIMMPARFTQPWLLLDGIYH----W----TKMANDELNQKKRLNDFTRKMIQRRRQIQNN 273
            |  |....:.|...|.::.....|:    |    ||...|....:..:.|...::|....:....
  Fly   246 P--QKISQLAAAVKQLFISQRDSYYGLGLWKYFPTKTYRDFARAEDLIYDVISEIIDHELEELKK 308

  Fly   274 NNG--NSERKCLLDHMIEISESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQD 336
            :..  :.|...|....:.|.|. :|....|..:....|:.||.:::...:.|.|..:|.:|....
  Fly   309 SAACEDDEAAGLRSIFLNILEL-KDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMP 372

  Fly   337 RCVLELATIFEDSNRAPTMTD-LHEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAKHTLPAGS 400
            |.:.|... :.|:|   .:.| |....|.:.||:|:.||.|:...:||.|.|::.|:.::|.||:
  Fly   373 RILSEFCE-YRDTN---ILQDALTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAGT 433

  Fly   401 NVFICP--YATHRLAHIYPDPEKFQPERFSPENSEN-----RHPYAFLPFSAGPRYCIGNRFAIM 458
             |.:|.  .|.|:.:: :...::|.|||:....:||     .:....:||..|.|.|.|.||..|
  Fly   434 -VVLCQNMIACHKDSN-FQGAKQFTPERWIDPATENFTVNVDNASIVVPFGVGRRSCPGKRFVEM 496

  Fly   459 EIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVRLKER 503
            |:..::::::.::.   |:....:...|...|.....|.:||.:|
  Fly   497 EVVLLLAKMVLAFD---VSFVKPLETEFEFLLAPKTPLSLRLSDR 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cyp4aa1	NP_611067.2	CYP4	81..498	CDD:410721	100/459 (22%)
shd	NP_996074.1	CYP24A1-like	98..532	CDD:410677	100/461 (22%)