DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and cyp26a1

DIOPT Version :9

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:492 Identity:119/492 - (24%)
Similarity:212/492 - (43%) Gaps:56/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LCSILILLVISLSIYTFYATLNTYLRSVLLSLRLTGPP---SLPFLGNC--MLVTDKDLMRRCAG 74
            ||:|::.:::.|:....:..|  .:|.|..:.|...||   .|||:|..  :::..:..:|....
Zfish    11 LCTIVLPVLLFLAAVKLWEML--MIRRVDPNCRSPLPPGTMGLPFIGETLQLILQRRKFLRMKRQ 73

  Fly    75 KAFDLYGSLVRIWVLLFPFFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLG-DGLITSSGSKWS 138
            |    ||.:.:..:...|...|:..::::.||..:.....|.:...:...|| |.|....|.:..
Zfish    74 K----YGCIYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTLSNVHGVQHK 134

  Fly   139 NHRRLIQPAFHHNLLEKFIDTF-VDASQSLYENLDAEAVGTEINIAKYVNNCVLDILNEAVLGV- 201
            |.::.|..||..:.||.:|... .:...::.|.|..::.   :.:...:...:..|....:||. 
Zfish   135 NKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQKDSC---VLVYPEMKKLMFRIAMRILLGFE 196

  Fly   202 --PIKKRGQDVAMMEDSPFRQGKIMMPARFTQPWLLLD----GIYHWTKMANDELNQKKRLNDFT 260
              .||...|::.    ..|.:   |:...|:.|   :|    |:|...:..|           |.
Zfish   197 PEQIKTDEQELV----EAFEE---MIKNLFSLP---IDVPFSGLYRGLRARN-----------FI 240

  Fly   261 RKMIQR--RRQIQNNNNGNSER-KCLLDHMIEISESNRDFTEEDIVNEACTFMLAGQDSVGAAVA 322
            ...|:.  |::||:::|.|.:: |..|..:||.|..:.:......:.||.|.:|.|.....|:.|
Zfish   241 HSKIEENIRKKIQDDDNENEQKYKDALQLLIENSRRSDEPFSLQAMKEAATELLFGGHETTASTA 305

  Fly   323 FTLFL-LTQNPECQDRCVLELATIFEDSNRAP----TMTDLHEMRYMEMCIKEALRLYPSVPLIA 382
            .:|.: |..|.|...:...|:....|.....|    :|..|.:::|....|||.||:.|.||...
Zfish   306 TSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLDQLKYTGCVIKETLRINPPVPGGF 370

  Fly   383 RKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYAFLPFSAGP 447
            |...:...|..:.:|.|.||......||.:|.::|:.::||||||..:..|:...:.::||..|.
Zfish   371 RVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKDEFQPERFMSKGLEDGSRFNYIPFGGGS 435

  Fly   448 RYCIGNRFAIMEIKTIVSRLLRSYQLL----PVTGKT 480
            |.|:|..||.:.:|..:..|.:....:    |.|.||
Zfish   436 RMCVGKEFAKVLLKIFLVELTQHCNWILSNGPPTMKT 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 p450 50..475 CDD:278495 107/450 (24%)
cyp26a1NP_571221.2 p450 14..487 CDD:299894 117/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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